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Split-decomposition method

DNA Barcoding the Native Flowering Plants and Conifers of Wales

Natasha de Vere, Tim C. G. Rich, Col R. Ford, Sarah A. Trinder, Charlotte Long, Chris W. Moore, Danielle Satterthwaite, Helena Davies, Joel Allainguillaume, Sandra Ronca, Tatiana Tatarinova, Hannah Garbett, Kevin Walker, Mike J. Wilkinson

published 06 Jun 2012

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progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

Aaron E. Darling, Bob Mau, Nicole T. Perna

published 25 Jun 2010

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Searching for Tissue-Specific Expression Pattern-Linked Nucleotides of UGT1A Isoforms

Wei Zhang, Wanqing Liu, Federico Innocenti, Mark J. Ratain

published 25 Apr 2007

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Sequencing DNA with nanopores: Troubles and biases

Clara Delahaye, Jacques Nicolas

published 01 Oct 2021

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Comparative Studies of Copy Number Variation Detection Methods for Next-Generation Sequencing Technologies

Junbo Duan, Ji-Gang Zhang, Hong-Wen Deng, Yu-Ping Wang

published 20 Mar 2013

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MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons

Vincent Ranwez, Sébastien Harispe, Frédéric Delsuc, Emmanuel J. P. Douzery

published 16 Sep 2011

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Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

Holly J. Atkinson, John H. Morris, Thomas E. Ferrin, Patricia C. Babbitt

published 03 Feb 2009

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Rapid 16S rRNA Next-Generation Sequencing of Polymicrobial Clinical Samples for Diagnosis of Complex Bacterial Infections

Stephen J. Salipante, Dhruba J. Sengupta, Christopher Rosenthal, Gina Costa, Jessica Spangler, Elizabeth H. Sims, Michael A. Jacobs, Samuel I. Miller, Daniel R. Hoogestraat, Brad T. Cookson, Connor McCoy, Frederick A. Matsen, Jay Shendure, Clarence C. Lee, Timothy T. Harkins, Noah G. Hoffman

published 29 May 2013

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A workflow with R: Phylogenetic analyses and visualizations using mitochondrial cytochrome b gene sequences

Emine Toparslan, Kemal Karabag, Ugur Bilge

published 15 Dec 2020

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A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

Julie D. Thompson, Benjamin Linard, Odile Lecompte, Olivier Poch

published 31 Mar 2011

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Phylo: A Citizen Science Approach for Improving Multiple Sequence Alignment

Alexander Kawrykow, Gary Roumanis, Alfred Kam, Daniel Kwak, Clarence Leung, Chu Wu, Eleyine Zarour, Phylo players , Luis Sarmenta, Mathieu Blanchette, Jérôme Waldispühl

published 07 Mar 2012

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RAxML and FastTree: Comparing Two Methods for Large-Scale Maximum Likelihood Phylogeny Estimation

Kevin Liu, C. Randal Linder, Tandy Warnow

published 21 Nov 2011

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MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

Wan-Ping Lee, Michael P. Stromberg, Alistair Ward, Chip Stewart, Erik P. Garrison, Gabor T. Marth

published 05 Mar 2014

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