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RNA extraction

Performance of amplicon and capture based next-generation sequencing approaches for the epidemiological surveillance of Omicron SARS-CoV-2 and other variants of concern

Carlos Daviña-Núñez, Sonia Pérez, Jorge Julio Cabrera-Alvargonzález, Anniris Rincón-Quintero, Ana Treinta-Álvarez, Montse Godoy-Diz, Silvia Suárez-Luque, Benito Regueiro-García

published 29 Apr 2024

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Phytophthora pluvialis maintenance, spore production and detached needle assays

Sophie Eccersall, Leann S. Vinson, Rebecca McDougal, Claudia-Nicole Meisrimler

published 21 Mar 2024

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A semi-automated and high-throughput approach for the detection of honey bee viruses in bee samples

Sofia Levin Nikulin, Poppy J. Hesketh-Best, Dean A. Mckeown, Marla Spivak, Declan C. Schroeder

published 14 Mar 2024

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Studies on the sequential pathology of Kyasanur Forest Disease (KFD) in Mouse brain: KFD virus induces apoptosis of neurons in cerebrum and hippocampus

Ullasgowda K. Srikanth, Chandranaik B. Marinaik, Suguna Rao, Amitha Reena Gomes, Doddamane Rathnamma, Shrikrishna Isloor, Bharath T. Lakshmikanth, Chinmayie K. Siddaramegowda, Apsana Rizwan, Sonnahallipura M. Byregowda, Mudalagiri D. Venkatesha, Archana Munivenkatarayappa, Raveendra Hegde

published 01 Mar 2024

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Rapid and specific detection of wheat spindle streak mosaic virus using RT-LAMP in durum wheat crude leaf extract

Monica Marra, Paolo Mussano, Eugenio Pinton, Cinzia Montemurro, Elena Baldoni, Claudio Ratti, Slavica Matić, Chiara D’Errico, Gian Paolo Accotto

published 29 Feb 2024

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Identification of SARS-CoV-2 variants in indoor dust

John Van Dusen, Haley LeBlanc, Nicholas Nastasi, Jenny Panescu, Austin Shamblin, Jacob W. Smith, Michael G. Sovic, Amanda Williams, Mikkel B. M. Quam, Seth Faith, Karen C. Dannemiller

published 09 Feb 2024

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An Open One-Step RT-qPCR for SARS-CoV-2 detection

Ariel Cerda, Maira Rivera, Grace Armijo, Catalina Ibarra-Henriquez, Javiera Reyes, Paula Blázquez-Sánchez, Javiera Avilés, Aníbal Arce, Aldo Seguel, Alexander J. Brown, Yesseny Vásquez, Marcelo Cortez-San Martín, Francisco A. Cubillos, Patricia García, Marcela Ferres, César A. Ramírez-Sarmiento, Fernán Federici, Rodrigo A. Gutiérrez

published 25 Jan 2024

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Development of modified CTAB and Trizol protocols to isolate high molecular weight (HMW) RNA from polyphenol and polysaccharides rich pigeonpea (Cajanuscajan (L.) Millsp

Pawan Mainkar, Deepanshu Jayaswal, Deepesh Kumar, Kuldip Jayaswall, Sandeep Jaiswal, Arvind Nath Singh, Sanjay Kumar, Rekha Kansal

published 08 Dec 2023

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Whole blood RNA extraction efficiency contributes to variability in RNA sequencing data sets

William W. Wilfinger, Hamid R. Eghbalnia, Karol Mackey, Robert Miller, Piotr Chomczynski

published 16 Nov 2023

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Evaluation of a novel lyophilized-pellet-based 2019-nCoV nucleic acid detection kit for the diagnosis of COVID-19

Yiyuan Xu, Tian Xu, Shaoting Chen, Huakang Yao, Yuxiang Chen, Yanfen Zeng, Falin Chen, Guanbin Zhang

published 25 Oct 2023

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Evaluation of a human mucosal tissue explant model for SARS-CoV-2 replication

Bhavna Gowan Gordhan, Carolina Herrera, Azure-Dee Pillay, Thabiso Seiphetlo, Christopher Shawn Ealand, Edith Machowski, Natasha Singh, Ntombexolo Seatholo, Kennedy Otwombe, Limakatso Lebina, Rebecca Frise, Gabriella Scarlatti, Francesca Chiodi, Neil Martinson, Julie Fox, Bavesh Davandra Kana

published 28 Sep 2023

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SARS-CoV-2 surface contamination in metro-Atlanta grocery stores

Travis W. Brown, Geun W. Park, Beth Wittry, Leslie Barclay, Margaret Person, Boris Relja, Scott Daly, Preeti Chhabra, Erin Kincaid, Jona Johnson, Ausaf Ahmad, Owen Herzegh, Jan Vinjé, Jennifer Murphy

published 19 Sep 2023

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Performance characteristics and operational feasibility assessment of a CRISPR based tata MD CHECK diagnostic test for SARS-CoV-2 (COVID-19)

Shubhada Shenai, Gita Nataraj, Minal Jinwal, Akhil S. Thekke Purakkal, Rajashree Sen, Nayana Ingole, Trupti Mathure, Sanjay Sarin, Sarabjit S. Chadha

published 14 Sep 2023

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