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Microbiome

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes

published 22 Apr 2013

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A Jungle in There: Bacteria in Belly Buttons are Highly Diverse, but Predictable

Jiri Hulcr, Andrew M. Latimer, Jessica B. Henley, Nina R. Rountree, Noah Fierer, Andrea Lucky, Margaret D. Lowman, Robert R. Dunn

published 07 Nov 2012

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Composition of Human Skin Microbiota Affects Attractiveness to Malaria Mosquitoes

Niels O. Verhulst, Yu Tong Qiu, Hans Beijleveld, Chris Maliepaard, Dan Knights, Stefan Schulz, Donna Berg-Lyons, Christian L. Lauber, Willem Verduijn, Geert W. Haasnoot, Roland Mumm, Harro J. Bouwmeester, Frans H. J. Claas, Marcel Dicke, Joop J. A. van Loon, Willem Takken, Rob Knight, Renate C. Smallegange

published 28 Dec 2011

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Antibiotic Resistance Is Prevalent in an Isolated Cave Microbiome

Kirandeep Bhullar, Nicholas Waglechner, Andrew Pawlowski, Kalinka Koteva, Eric D. Banks, Michael D. Johnston, Hazel A. Barton, Gerard D. Wright

published 11 Apr 2012

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Reduced Incidence of Prevotella and Other Fermenters in Intestinal Microflora of Autistic Children

Dae-Wook Kang, Jin Gyoon Park, Zehra Esra Ilhan, Garrick Wallstrom, Joshua LaBaer, James B. Adams, Rosa Krajmalnik-Brown

published 03 Jul 2013

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Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

Patrick D. Schloss, Dirk Gevers, Sarah L. Westcott

published 14 Dec 2011

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A Metagenomic Approach to Characterization of the Vaginal Microbiome Signature in Pregnancy

Kjersti Aagaard, Kevin Riehle, Jun Ma, Nicola Segata, Toni-Ann Mistretta, Cristian Coarfa, Sabeen Raza, Sean Rosenbaum, Ignatia Van den Veyver, Aleksandar Milosavljevic, Dirk Gevers, Curtis Huttenhower, Joseph Petrosino, James Versalovic

published 13 Jun 2012

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Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents

Christian Hoffmann, Serena Dollive, Stephanie Grunberg, Jun Chen, Hongzhe Li, Gary D. Wu, James D. Lewis, Frederic D. Bushman

published 17 Jun 2013

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The Effects of Circumcision on the Penis Microbiome

Lance B. Price, Cindy M. Liu, Kristine E. Johnson, Maliha Aziz, Matthew K. Lau, Jolene Bowers, Jacques Ravel, Paul S. Keim, David Serwadda, Maria J. Wawer, Ronald H. Gray

published 06 Jan 2010

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Baseline human gut microbiota profile in healthy people and standard reporting template

Charles H. King, Hiral Desai, Allison C. Sylvetsky, Jonathan LoTempio, Shant Ayanyan, Jill Carrie, Keith A. Crandall, Brian C. Fochtman, Lusine Gasparyan, Naila Gulzar, Paul Howell, Najy Issa, Konstantinos Krampis, Lopa Mishra, Hiroki Morizono, Joseph R. Pisegna, Shuyun Rao, Yao Ren, Vahan Simonyan, Krista Smith, Sharanjit VedBrat, Michael D. Yao, Raja Mazumder

published 11 Sep 2019

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Evaluation of 16S rDNA-Based Community Profiling for Human Microbiome Research

Jumpstart Consortium Human Microbiome Project Data Generation Working Group

published 13 Jun 2012

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Analyses of the Microbial Diversity across the Human Microbiome

Kelvin Li, Monika Bihan, Shibu Yooseph, Barbara A. Methé

published 13 Jun 2012

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The artificial sweetener acesulfame potassium affects the gut microbiome and body weight gain in CD-1 mice

Xiaoming Bian, Liang Chi, Bei Gao, Pengcheng Tu, Hongyu Ru, Kun Lu

published 08 Jun 2017

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