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FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
published 10 Mar 2010
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Systematic Validation of Protein Force Fields against Experimental Data
published 22 Feb 2012
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Modeling Gastrulation in the Chick Embryo: Formation of the Primitive Streak
published 11 May 2010
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Topological Data Analysis of Biological Aggregation Models
published 13 May 2015
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Molecular Dynamics Simulations of the Human Glucose Transporter GLUT1
published 28 Apr 2015
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Simulation vs. Reality: A Comparison of In Silico Distance Predictions with DEER and FRET Measurements
published 25 Jun 2012
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Understanding Lignin-Degrading Reactions of Ligninolytic Enzymes: Binding Affinity and Interactional Profile
published 29 Sep 2011
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Bare Bones Pattern Formation: A Core Regulatory Network in Varying Geometries Reproduces Major Features of Vertebrate Limb Development and Evolution
published 28 May 2010
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BioNet: A Python interface to NEURON for modeling large-scale networks
published 02 Aug 2018
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ReaDDy - A Software for Particle-Based Reaction-Diffusion Dynamics in Crowded Cellular Environments
published 11 Sep 2013
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Discovering Conformational Sub-States Relevant to Protein Function
published 28 Jan 2011
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The Impact of Small Molecule Binding on the Energy Landscape of the Intrinsically Disordered Protein C-Myc
published 16 Jul 2012
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Comparing Molecular Dynamics Force Fields in the Essential Subspace
published 26 Mar 2015
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