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Software tools

Teaching and Learning with Mobile Technology: A Qualitative Explorative Study about the Introduction of Tablet Devices in Secondary Education

Hannelore Montrieux, Ruben Vanderlinde, Tammy Schellens, Lieven De Marez

RNA-Seq differential expression analysis: An extended review and a software tool

Juliana Costa-Silva, Douglas Domingues, Fabricio Martins Lopes

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

Fran Supek, Matko Bošnjak, Nives Škunca, Tomislav Šmuc

powerlaw: A Python Package for Analysis of Heavy-Tailed Distributions

Jeff Alstott, Ed Bullmore, Dietmar Plenz

A Practical Comparison of De Novo Genome Assembly Software Tools for Next-Generation Sequencing Technologies

Wenyu Zhang, Jiajia Chen, [ ... ], Bairong Shen

Evaluation of Algorithm Performance in ChIP-Seq Peak Detection

Elizabeth G. Wilbanks, Marc T. Facciotti

Quilt Plots: A Simple Tool for the Visualisation of Large Epidemiological Data

Handan Wand, Jenny Iversen, Matthew Law, Lisa Maher

Classification and Identification of Bacteria by Mass Spectrometry and Computational Analysis

Sascha Sauer, Anja Freiwald, [ ... ], Klaus Geider

cocor: A Comprehensive Solution for the Statistical Comparison of Correlations

Birk Diedenhofen, Jochen Musch

Interpretation and identification of within-unit and cross-sectional variation in panel data models

Jonathan Kropko, Robert Kubinec

A Comparative Study of Techniques for Differential Expression Analysis on RNA-Seq Data

Zong Hong Zhang, Dhanisha J. Jhaveri, [ ... ], Qiong-Yi Zhao

SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data

Hugo Varet, Loraine Brillet-Guéguen, Jean-Yves Coppée, Marie-Agnès Dillies

sgRNAcas9: A Software Package for Designing CRISPR sgRNA and Evaluating Potential Off-Target Cleavage Sites

Shengsong Xie, Bin Shen, [ ... ], Yonglian Zhang

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