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Genetic code

Genetic codes optimized as a traveling salesman problem

Oliver Attie, Brian Sulkow, Chong Di, Weigang Qiu

A precedented nuclear genetic code with all three termination codons reassigned as sense codons in the syndinean Amoebophrya sp. ex Karlodinium veneficum

Tsvetan R. Bachvaroff

Optimization of the standard genetic code according to three codon positions using an evolutionary algorithm

Paweł Błażej, Małgorzata Wnętrzak, Dorota Mackiewicz, Paweł Mackiewicz

Exact correspondence between walk in nucleotide and protein sequence spaces

Dmitry N. Ivankov

Directed Chemical Evolution with an Outsized Genetic Code

Casey J. Krusemark, Nicolas P. Tilmans, Patrick O. Brown, Pehr B. Harbury

Anticodon Modifications in the tRNA Set of LUCA and the Fundamental Regularity in the Standard Genetic Code

Peter T. S. van der Gulik, Wouter D. Hoff

Randomness in Sequence Evolution Increases over Time

Guangyu Wang, Shixiang Sun, Zhang Zhang

Forced Ambiguity of the Leucine Codons for Multiple-Site-Specific Incorporation of a Noncanonical Amino Acid

Inchan Kwon, Eun Sil Choi

Analysis of Genetic Code Ambiguity Arising from Nematode-Specific Misacylated tRNAs

Kiyofumi Hamashima, Masaru Mori, [ ... ], Akio Kanai

An In Vivo Photo-Cross-Linking Approach Reveals a Homodimerization Domain of Aha1 in S. cerevisiae

Michael Berg, Annette Michalowski, [ ... ], Kai Sohn

Structural Phylogenomics Retrodicts the Origin of the Genetic Code and Uncovers the Evolutionary Impact of Protein Flexibility

Gustavo Caetano-Anollés, Minglei Wang, Derek Caetano-Anollés

Molecular Codes in Biological and Chemical Reaction Networks

Dennis Görlich, Peter Dittrich

A Simple Method for Analyzing Exome Sequencing Data Shows Distinct Levels of Nonsynonymous Variation for Human Immune and Nervous System Genes

Jan Freudenberg, Peter K. Gregersen, Yun Freudenberg-Hua

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