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Open Access

Peer-reviewed

Research Article

Genetic Surveillance Detects Both Clonal and Epidemic Transmission of Malaria following Enhanced Intervention in Senegal

  • Rachel Daniels ,

    Contributed equally to this work with: Rachel Daniels, Hsiao-Han Chang, Daniel L. Hartl, Sarah K. Volkman

    Affiliations Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, Massachusetts, United States of America, Broad Institute, Cambridge, Massachusetts, United States of America

    ⨯
  • Hsiao-Han Chang ,

    Contributed equally to this work with: Rachel Daniels, Hsiao-Han Chang, Daniel L. Hartl, Sarah K. Volkman

    Affiliation Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, United States of America

    ⨯
  • Papa Diogoye Séne,

    Affiliation Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal

    ⨯
  • Danny C. Park,

    Affiliations Broad Institute, Cambridge, Massachusetts, United States of America, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, United States of America

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  • Daniel E. Neafsey,

    Affiliation Broad Institute, Cambridge, Massachusetts, United States of America

    ⨯
  • Stephen F. Schaffner,

    Affiliation Broad Institute, Cambridge, Massachusetts, United States of America

    ⨯
  • Elizabeth J. Hamilton,

    Affiliation Department of Human Evolutionary Biology, Harvard University, Cambridge, Massachusetts, United States of America

    ⨯
  • Amanda K. Lukens,

    Affiliations Broad Institute, Cambridge, Massachusetts, United States of America, Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, Massachusetts, United States of America

    ⨯
  • Daria Van Tyne,

    Affiliation Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, Massachusetts, United States of America

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  • Souleymane Mboup,

    Affiliation Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal

    ⨯
  • Pardis C. Sabeti,

    Affiliations Broad Institute, Cambridge, Massachusetts, United States of America, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, United States of America, FAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts, United States of America

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  • Daouda Ndiaye,

    Affiliation Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal

    ⨯
  • Dyann F. Wirth,

    Affiliations Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, Massachusetts, United States of America, Broad Institute, Cambridge, Massachusetts, United States of America

    ⨯
  • Daniel L. Hartl ,

    Contributed equally to this work with: Rachel Daniels, Hsiao-Han Chang, Daniel L. Hartl, Sarah K. Volkman

    Affiliation Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, United States of America

    ⨯
  • Sarah K. Volkman

    Contributed equally to this work with: Rachel Daniels, Hsiao-Han Chang, Daniel L. Hartl, Sarah K. Volkman

    svolkman@hsph.harvard.edu

    Affiliations Department of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, Massachusetts, United States of America, Broad Institute, Cambridge, Massachusetts, United States of America, School of Nursing and Health Sciences, Simmons College, Boston, Massachusetts, United States of America

    ⨯

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