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Research Article

DCGL v2.0: An R Package for Unveiling Differential Regulation from Differential Co-expression

  • Jing Yang equal contributor,

    equal contributor Contributed equally to this work with: Jing Yang, Hui Yu

    Affiliations: School of Biotechnology, East China University of Science and Technology, Shanghai, P. R. China, Bioinformatics Center, Key Laboratory of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, P. R. China

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  • Hui Yu equal contributor,

    equal contributor Contributed equally to this work with: Jing Yang, Hui Yu

    Affiliations: Shanghai Center for Bioinformation Technology, Shanghai Industrial Technology Institute, Shanghai, P. R. China, Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America

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  • Bao-Hong Liu,

    Affiliation: Shanghai Center for Bioinformation Technology, Shanghai Industrial Technology Institute, Shanghai, P. R. China

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  • Zhongming Zhao,

    Affiliations: Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America, Departments of Psychiatry, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America, Department of Cancer Biology, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America

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  • Lei Liu,

    Affiliation: Bioinformatics Center, Key Laboratory of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, P. R. China

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  • Liang-Xiao Ma,

    Affiliation: Shanghai Center for Bioinformation Technology, Shanghai Industrial Technology Institute, Shanghai, P. R. China

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  • Yi-Xue Li mail,

    yyli@scbit.org (YYL); yxli@scbit.org (YXL)

    Affiliations: School of Biotechnology, East China University of Science and Technology, Shanghai, P. R. China, Shanghai Center for Bioinformation Technology, Shanghai Industrial Technology Institute, Shanghai, P. R. China

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  • Yuan-Yuan Li mail

    yyli@scbit.org (YYL); yxli@scbit.org (YXL)

    Affiliation: Shanghai Center for Bioinformation Technology, Shanghai Industrial Technology Institute, Shanghai, P. R. China

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  • Published: November 20, 2013
  • DOI: 10.1371/journal.pone.0079729

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