Inferring Carbon Sources from Gene Expression Profiles Using Metabolic Flux Models

• Aaron Brandes ,

  Contributed equally to this work with: Aaron Brandes, Desmond S. Lun

  Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

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• Desmond S. Lun ,

  Contributed equally to this work with: Aaron Brandes, Desmond S. Lun

  Affiliations Department of Computer Science and Center for Computational and Integrative Biology, Rutgers University, Camden, New Jersey, United States of America, Phenomics and Bioinformatics Research Centre, School of Mathematics and Statistics, and Australian Centre for Plant Functional Genomics, University of South Australia, Mawson Lakes, South Australia, Australia

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• Kuhn Ip,

  Affiliations Department of Computer Science and Center for Computational and Integrative Biology, Rutgers University, Camden, New Jersey, United States of America, Phenomics and Bioinformatics Research Centre, School of Mathematics and Statistics, and Australian Centre for Plant Functional Genomics, University of South Australia, Mawson Lakes, South Australia, Australia

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• Jeremy Zucker,

  Affiliations Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America, Department of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America

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• Caroline Colijn,

  Affiliation Department of Engineering Mathematics, University of Bristol, Bristol, United Kingdom

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• Brian Weiner,

  Affiliation Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

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• James E. Galagan

  * E-mail: jgalag@bu.edu

  Affiliations Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America, Department of Biomedical Engineering and Department of Microbiology, Boston University, Boston, Massachusetts, United States of America

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