Evaluating Characteristics of De Novo Assembly Software on 454 Transcriptome Data: A Simulation Approach

Open Access

Peer-reviewed

Research Article

Marvin Mundry,

Affiliation Evolutionary Bioinformatics, Institute for Evolution and Biodiversity, Westfaelische-Wilhelms-University, Muenster, Germany
⨯
Erich Bornberg-Bauer,

Affiliation Evolutionary Bioinformatics, Institute for Evolution and Biodiversity, Westfaelische-Wilhelms-University, Muenster, Germany
⨯
Michael Sammeth,

Affiliation Functional Bioinformatics, Centre Nacional d'Anàlisi Genòmica (CNAG), Barcelona, Spain
⨯
Philine G. D. Feulner

* E-mail: p.feulner@wwu.de

Affiliation Evolutionary Bioinformatics, Institute for Evolution and Biodiversity, Westfaelische-Wilhelms-University, Muenster, Germany
⨯

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Transcriptome analysis
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Computer software
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Genomics
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Sequence alignment
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Alternative splicing
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Gene expression
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Simulation and modeling
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Next-generation sequencing
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