yeast kos

P-value color scale
> 10-3 10-3 to 10-5 10-5 to 10-7 10-7 to 10-9 < 10-9

 

GO term Description P-value FDR q-value Enrichment (N, B, n, b) Genes
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 1.7E-15 5.99E-13 26.14 (915,10,35,10) [+] Show genes
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 1.7E-15 2.99E-13 26.14 (915,10,35,10) [+] Show genes
GO:0098800 inner mitochondrial membrane protein complex 6.15E-14 7.21E-12 9.73 (915,43,35,16) [+] Show genes
GO:0098798 mitochondrial protein complex 2.8E-12 2.46E-10 7.89 (915,53,35,16) [+] Show genes
GO:0044455 mitochondrial membrane part 1E-11 7.06E-10 7.34 (915,57,35,16) [+] Show genes
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 1.17E-11 6.86E-10 16.34 (915,16,35,10) [+] Show genes
GO:0098796 membrane protein complex 2.35E-9 1.18E-7 5.29 (915,79,35,16) [+] Show genes
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 6.14E-8 2.7E-6 26.14 (915,5,35,5) [+] Show genes
GO:0016020 membrane 5.82E-7 2.28E-5 1.89 (915,415,35,30) [+] Show genes
GO:0044425 membrane part 6.34E-7 2.23E-5 2.04 (915,359,35,28) [+] Show genes
GO:0031966 mitochondrial membrane 1.22E-6 3.91E-5 3.52 (915,119,35,16) [+] Show genes
GO:0016021 integral component of membrane 1.65E-6 4.84E-5 2.12 (915,321,35,26) [+] Show genes
GO:0031224 intrinsic component of membrane 2.18E-6 5.9E-5 2.09 (915,325,35,26) [+] Show genes
GO:0005743 mitochondrial inner membrane 3.95E-5 9.93E-4 3.56 (915,88,35,12) [+] Show genes
GO:0019866 organelle inner membrane 5E-5 1.17E-3 3.49 (915,90,35,12) [+] Show genes
GO:0000274 mitochondrial proton-transporting ATP synthase, stator stalk 5.14E-5 1.13E-3 26.14 (915,3,35,3) [+] Show genes
GO:0045265 proton-transporting ATP synthase, stator stalk 5.14E-5 1.06E-3 26.14 (915,3,35,3) [+] Show genes
GO:0045269 proton-transporting ATP synthase, central stalk 5.14E-5 1.01E-3 26.14 (915,3,35,3) [+] Show genes
GO:0005756 mitochondrial proton-transporting ATP synthase, central stalk 5.14E-5 9.53E-4 26.14 (915,3,35,3) [+] Show genes
GO:0005887 integral component of plasma membrane 5.19E-5 9.14E-4 3.78 (915,76,35,11) [+] Show genes
GO:0031226 intrinsic component of plasma membrane 5.9E-5 9.89E-4 3.73 (915,77,35,11) [+] Show genes
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 6.32E-5 1.01E-3 10.05 (915,13,35,5) [+] Show genes
GO:0044459 plasma membrane part 1.53E-4 2.34E-3 3.38 (915,85,35,11) [+] Show genes
GO:0005886 plasma membrane 1.91E-4 2.81E-3 2.69 (915,136,35,14) [+] Show genes
GO:0032991 protein-containing complex 3.03E-4 4.27E-3 2.34 (915,179,35,16) [+] Show genes
GO:0005739 mitochondrion 5.62E-4 7.61E-3 1.80 (915,320,35,22) [+] Show genes
GO:0031090 organelle membrane 6.56E-4 8.56E-3 2.11 (915,211,35,17) [+] Show genes
GO:0044429 mitochondrial part 8.61E-4 1.08E-2 2.15 (915,195,35,16) [+] Show genes

Species used: Saccharomyces cerevisiae

The system has recognized 950 genes out of 953 gene terms entered by the user.
8 genes were recognized by gene symbol and 942 genes by other gene IDs .
35 duplicate genes were removed (keeping the highest ranking instance of each gene) leaving a total of 915 genes.

The GOrilla database is periodically updated using the GO database and other sources.
The GOrilla database was last updated on Mar 17, 2018

This results page will be available on this site for one month from now (until May 4, 2018 ). You can bookmark this page and come back to it later.


'P-value' is the enrichment p-value computed according to the mHG or HG model. This p-value is not corrected for multiple testing of 352 GO terms.

'FDR q-value' is the correction of the above p-value for multiple testing using the Benjamini and Hochberg (1995) method.
Namely, for the ith term (ranked according to p-value) the FDR q-value is (p-value * number of GO terms) / i.

Enrichment (N, B, n, b) is defined as follows:
N - is the total number of genes
B - is the total number of genes associated with a specific GO term
n - is the number of genes in the top of the user's input list or in the target set when appropriate
b - is the number of genes in the intersection
Enrichment = (b/n) / (B/N)

Genes: For each GO term you can see the list of associated genes that appear in the optimal top of the list.
Each gene name is specified by gene symbol followed by a short description of the gene

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