#NEXUS 
[RPB1 eukaryotes, edited alignment, Figure S2]
[Shehre-Banoo Malik, Cynthia D. Brochu, Ivana Bilic, Jing Yuan, Michael Hess, John M. Logsdon Jr., and Jane M. Carlton]
[Phylogeny of parasitic Parabasalia and free-living relatives inferred from conventional markers vs. Rpb1, a single-copy gene. PLOS One (2011) doi 10.1371/journal.pone.0020774. sbmalik@dal.ca]
[ambiguously aligned sites and constant sites removed]

BEGIN DATA;
	DIMENSIONS  NTAX=49 NCHAR=857;
	FORMAT DATATYPE=PROTEIN interleave=no MISSING=? GAP=- ;
MATRIX
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36124Homo                                                  IELKPVFHVGFLVKTMKVLRCVCFFCSKLLVDSNNIKDILAKSKPKKRLTHVYDLCKNICEGGCGRYQPRIRRGLELYAEWKEKKILLSPERVHEIFKRISDEECFVLMEPRYARPEWMIVTVLPVPPLSVPAVQGSARNQDDLTHKLADIVKINNQLRREQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGEGRVGNLMVDFSATTPPNLSIDQVGRSIAANMTFAEIVTPFIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHKPSDLHLQTGYKVEHMCDGIVITKMSMGRVRILPWSTFLLSVTTPLLPSLETRAEIQELAMVPRMIVTPQSNRPVMGIVTTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQAILKRPLTIFSLIIPGINCIRTPYKHISPGTKVVVENGELIMILCKKSLGTSAGSLVISYLEMGHDITRLFYSNITVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPNTLRQTFNQVNRILNDARDKTGSSAQKSLSEYNFKSMVVSASKIISVIAVVGNVEGKIPFGFKHTHFIKDDYGPESRFVENSYLATPTFFAMGELIVAETIQRLISMSVMVKATVNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMREDREVLRV-IFPTVLPCNLLMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPEMVALAAQSLGA   [856]
12642614Monosiga                                           IVLKPVFHAGFLPKIISVLRCVCLYCSKLRVEHSDLQAILSQTKPKHRLQAVSRLCSRQCHRGCGKMQPRVRRTLQLLGEWEDRKRPITAAEVLKCFRGISDEDCRIIFDPVYTRPDFMIIEVLPVPPLAVPSVGESGHSADDLTYQLGDIIKTNISLQEIANGATPHMIEECVEYIQFKVATLMDNNLPHMPQSQQRSGRPIKAISQRLKGEGRVGNLMVDFSATTPPNLAIDQVGRTVAAKLTVPERVTNFLNKMNQYVANGPTQHPGARYIIQEDGTRIDLHIASHSDRTLQPGFIVEHLQDNVIITKMSMGRVKVLPWSTFMLSVTSPLVPSLGSRAEIEEIMMVHKNILTPQSNRPVMGIITTVARRMTFRDCFIEREQLMHLLMWMPNWDGKIPVAIVAKELTLVSMIIPRINLEGKATPYLTVHTKVIISKGVLISILCKSMLGAKGGGVIAITVEHGLEEARQFYGNITVINNWLLIHGHSIGIGDAVADQDTNKRIEELTQEATRSVDELITKAQADDIKPKPNTVRETFVEVNTVLNDMVNKAGKSAQNSLSIHNFKAMSTASGPIISIIACVGNVEGKIPFGFKYTHFVKDDYGPDSRFVFNSYFKSAQMFAMGELIVAETIQRLVSMGLRLNGSINSNGDLIQLCYGEDGMDGACLEKQGLPTLTPSDQGFERDFCNTGNKLASLRQYLVGNIVDDINADDEMLQELEDEWQRLQDDRQFLRS-VFPKVLPVQLRLIISAQKEFNIDPRRPTDLSPAHVAQAIRTFTDRLVVIPGDDPLSKVAQRNATLLFNCNLRSVLSSRQCIVRHRLNTKAFDWILGEVEKRFMQAQAQPEMVALAAQSLGA   [856]
4398Saccharomyces                                          IDLKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNMRQALAIKDSKKRFAAIWTLCKMVCETGCGNTQPTIRKGLKLVGSWKPELRVLSTEEILNIFKHISVKDFTSLFNEVFSRPEWMILTCLPVPPPPVPSINESQRGEDDLTFKLADILKANISLETEHNGAPHHAIEEAESLLQFHVATYMDNDIAGQPQALQKSGRPVKSIRARLKGEGRIGNLMVDFSATSGPNLELDQVGKSIAKTLTYPEVVTPYIDRLTQLVRNGPNEHPGAKYVIRDSGDRIDLRYSRAGDIQLQYGWKVEHIMDNPVLSKMSMARVKVIPYSTFLLSVTSPLVPSEETRAELSQLCAVPLQIVSPQSNKPCMGIVTCGIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTAIIKKPLSILSVAIPNIHLQRFGTTLLSPKNGMLIIDGQIIFVVEKKTVGSSNGGLIVVTREKGPQVCAKLFGNIKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEAKKKVLDVTKEAQANLLTAKHMTLRESFDNVVRFLNEARDKAGRLAEVNLKDLNVKQMVMASSFIIAMSACVGSVEGKIAFGFVDTHFSKDDYSPESKFVENSYLRTPQFFAMGELIVAETIQRLVALDIMVHNTTNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRVDLLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDRKFLRE-VFVDPLPVNIRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPEMVVLAAQSIGA   [856]
CAOG_01309Capsasporaowczarzaki                             IELKPVFNVTMMTKIQKTLKSVCYHCSRLLVSPEDYKHAQRTNNMSERFRRLSTACFTRCGGGCGNVQPKYKRGLSLTYEFRTGTQTLSPEKAHEILKRISDEDCRALFNPEQGRPDWMIITVLPVPPMTVPSVDSVARGIDDLTHKLADIIKANHNLRQELRGSPAHIMEEYTKLLQYHVATYADNEIPGVATAQQKSGRPLKSIRQRMKGEGRIGNLMVDFSATTAPNLSLDEVGRSIALNLTFPEMVTPYIDRMYELVRRGALEHPGAKYVIRDDGTRIDLRFSQGQEIHLEPGYRVEHIVDGPVISKMSMGRIRVLPWSTFLLSVTTPLVPNLETRAEVTEIMSVSRQILTPAGNRPVMGIVTTGSRKLTKRDTFIEMDLMMQLLMWLPGWTGHVPQAILKRPMTIFSMIIPAVNLTRTNYVHMSPSTKVLIEKGRLLSIICKKTLGPSAGGLIILFKEWGHEVARNFFNACRVVNYWLMWEGHSIGIGDAVADDATMMQVEDAIRRAKEDVKKVVESAQHGRLESTPNTLRETFNEVNKYLNNAREDAGKKVQDSLGDFNFRLMAVASSVLISVIACVGNVEGKIPFGFRFTHFVKDDYGPESRFVENSYLKTPSFFAMGEVIVSETIQRLVCMDVMVKGTVNSLGDVIQFVYGEDGLDGAHLEFGNQPILAPNNDRFNSLYKYDDKTLNELSVRLTPEIYENVM-TVEMQDALEREFNQLATDRTLLRA-LFPT-VPVNVPLIWNAQKTFNIDKRHQSDLHPVAVIEGVRRLTENLVIVKGSDPISVEAQNNAICLFGIHLRSVLNSKRVLLEHRLHSQAFEWLLGEIESRFQQAKVEPEMVALAAQSLGA   [854]
281203888PolysphondyliumpallidumPN500                      IELKPVFHIGFINTVLKILKCVCYHCSKLLVDTDDFRQALKIKNPKRRLNAVVDICKKVCAVGCGNVLPKITKELKFVVEFKEKKSVLSAERVHSILKRIRDDDARAMLNPEWARPDWMVITVLPVPPPPVPSIDTASRGEDDLTHKLADIVKANRELRKEKNGAPAHIITEATQFLQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGEGRIGNLMVDFSATTAPNLSIDQVGRSIALNLTYPETVTPFIDRMRELIRNGPNEHPGAKYIIREDGTRFDLRFVKITDTHLECGYKVEHIQDGVVISKMSMGRIKVMPYSTFLLSVTSPLVPSLETRAEIIEIMMVPRQIVSPQSNRPVMGIVTLGSMKFTKRDTFVERDLMMNILMWLPSWDGKIPPAIWKKKLTLFSLIIPNINLQRFKEKSEMAATVVIIDQGELLTILCKRSLGAANGSIIVVMNEHGHDSCRLFIDQTTVVNHWLINHGFTVGIGDTIADAATMSKVTSAIANAKTQVKELIIKAQSNQFECQPRSMLESFKEVNRVLNTARDDAGTSAQRSLQESNVKAMVNASSFIISMMACVGNVEGKVPFGFQNTHFTKDDYGPESRFVENSYLRTPQFFAMGELIVSETIQRLVAMDVSVKATVNSLGDVIQFAYGEDGLDSCFVENQMFDSLKRDNQDFIKLYKHQIDRSDYGDGWINPLIIEEIRNDSTIRETLDREFKRIEFDRNLLRTEIIPTPLPVNLRMIINAHKQFGIDHRTISDLNPAHVVNSIEGLISRLKIIAQIDAAWSETHQNATLLFSILLRSTLSSKRVLEEFRLNEKAFNWMVGEVESKFLLSIVNPEMVALAAQSIGA   [857]
Dictyosteliumpurpureum1.149604GID1.0040293                 IELKPVFHIGFIDTVLKILRCVCFHCSKLLTDTSEFRQALKIKNQKHRLNAVVEICKKVCAIGCGNVLPKITKDLKIIVEFKEKKSVLSAERVLNILKRIKDEDSIAMINPDWAKADWMVATVLPVPPPPVPSIDTSTRGEDDLTHKLADIVKANKELQREKNGAPAHIITEATQFLQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGEGRIGNLMVDFSATTAPNLSIDQVGRSIALNLTYPETVTPFIDKMRELIRNGPNEHPGAKYIIREDGTRFDLRFVKVSDTHLECGYKVEHINDGVVISKMSMGRIKVMPYSTFLLSVTSPLVPTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVTLGSRLFTKRDTFIERDLVMNILMWLPSWDGKVPPAILKKQLTLFSLIIPDINLIRFEPNECSAGTRVIIERGELLAILCKRSLGAANGSIIVVMNEHGHDTCRLFIDQTTVVNHWLINRGFTMGIGDTIADAQTMEKVTLTISSAKNQVKELIIKAQNKQFECQPKSVMETFQKVNQVLNKARDTAGSSAQNSLSEANLKAMVTASSFIISMMACVGNVEGKVPFGFQSTHFTKDDYGPESRFVENSYLRTPQFFAMGELIVSETIQRLVAMDVSIKATVNSLGDVIQFAYGEDGIDGCFVESQSIDSLRKDNHDLERMYKHMVEKPDYGEGWMDPLVIELVRGDPLIRDTLEKEFERIKSDRTLMRNEIIPTPLPVNLRLITNAQKLFNIDIRRVSDLNPAFVVLEIEKVVSRLKIIATADTAWSEVYHNATLLFSILVRSTMASKRVLTEFRLTEKAFLWVVGEIESKFLQALAHPEMVALAAQSIGA   [857]
3172136Acanthamoebacastellani                              LELKPVFNIGFLTTVLKILRSVCFHCSKLLVDEAQ-----ELKNVKHRFARVYTLAKTICEGGCGNFQPKITKGMKIMAEFKEKKQLLTAEKVHAILKLISDEDCLAMFDPKWARPDWMIITIMPIPPPPVPSIDSAARGEDDLTHKLADIIKANANLRKEANGAAAHIISQFQELLQYHIATFIDNEIPGFPQATVRSGRALKSLKQRLRGEGRIGNLMVDFSATTGPNISIDEVGRSIALNLTYPELVTPFIDKMYELIRNGPTEHPGAKYIIRDDGQRLDLRFAKASDLHLEYGYKVEHIQDGVIISKMSMGKVKIMPYSTFLLSVTTPMVPTPGARAEVIELMMVPKQIVTAQSNKPVIGIVTLGGCLLTQRDTFIEKDVMMNILMWLESWDGTVPTTILKKQLTVFSLIIPRTNFVNAEEPDMSFTNKVLIEEGELVSILNKKTLGTSHKSLVVIWNEHGSEVCKHFLNQVHVVNYWLLHHGFSVGVGDTIADEETLAKITQTIRKAKDEVKERQLEAQQGQLERQPRTMMESFFVINQILNKARDDAGNSAQKSLRRSNFKAMVIASSAIISVLACVGNVEGKIPFCFRDTHFVKDDFGPESRFVENSYLRTPQFFAMGELIVAETIQRLVALDVMVKYTVNSLGDVIQFLYGEDGMDGQTVETQPLDALKMSNEGVVLKYQHDYDSPSWGEGWIDPVIADAIANSPEKKRILDKEFEQILADRRLLREKIFLAPLPVNLTMILNAQKIFHLGPKKVSDLDPCQIVEDLGNLIERLVVIPGQDDISKEAQANAILLFSILLRFTLASRRVLQEYRLDQISWDWLLGEITDRFYKSLCDPEMIALAAQSIGA   [852]
AMSG_09602Thecamonastrahens                                LDLKAVYHLGFINYVLKILRCVCVNCSRLLIDVNDYKASLDRAEPQDRLFLLSTLCSTRCPSGCGNYQPTYRRGIKIRATYGTRKTRMSAEQVREIFARISDKDCLAMLSPKWARPEWLITTVMPIPPPAVPHVSSTQRNEDDLTLALAEIIKANKTLSTIINGSPQNVINEFVDLLQHHTGTYISNTSPAFAPAENRSGRPLKTISERLKGEGRVGNLMVDFSATTPPNLNVDQVGRSIAANLTFPEYVTAFRESLMALVRNGPDAYPGAKTIIRDDGTKLDLRYIRETDLVLAPGYVVEHVRDGVVVSKMSMGKIKVMPYSTFLLSVTTPLVPSLGAKAEVMEIMMVPKNIVTPASNRPVMGIVTLGTYLFTSRDTFMERDLVMNLLMWVPDWDGRIPTAILKKPLTLFSLIMPNVNLRTKAEGPISPTTKVLIEAGVHLSRLCKKTVGNKANGLILVWIEHGPEAARSFLDAIRVVNNWLCQHAFSVGIGDMVADDRTMANIHQLLKDAKVKVRELIHDAQQGKLVSKPMTMRETFAEVNSTLNIASGQGGTSAGLSLRADRVKIMVDGSSSIIGMVACVGNVEGKIPYGFVGTHFHKDDYGPESRFVTNSYLKTPQFYAMGELIVAKTVQRLVAMSLMVQSTVNAQGVVIQFLYGEDGMEATLLEHQFLDSAMMTNERLHAVYSINTSNEEMA-RYTTPQVWNELKESRALREELKDEFNTIAADRDMLRRVCSTTVLPVNLKLIWNAQKIHS-SPSSVSDLSPHDIITGVRSLLDDLVVCRGDDPITREAQANATMLFKAHVRATLASKRVLREYKLSSAAFEWLLGEIRTKFLTTIAHPEMVALAAQSIGA   [855]
15233338Arabidopsis                                        LELKPMYHVGFMKTVLSIMRCVCFNCSKILADEVCFRQAMKIKNPKNRLKKILDACKTKCDGGCGAQQPKLTIGMKMIAEYKERKQTLGADRVLSVLKRISDADCQLLFNPKFARPDWMILEVLPIPPPPVPSVDATSRSEDDLTHQLAMIIRHNENLKREKNGAPAHIISEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAEGRIGNLMVDFSATTPPTINIDELGWSIALNLTYPETVTPYIERLKELVDYGPHPPPGAKYIIRDDGQRLDLRYLKSSDQHLELGYKVEHLQDGFVLSKMSIGRIRIMPYSTFLLSVTSPMVPSFETRAEVLELMMVPKCIVSPQANRPVMGIVTLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAAILKRPLTVFNLIIPKINLLRYETGFITPGTQVRIERGELLATLCKKTLGTSNGSLVVIWEEVGPDAARKFLGHTWLVNYWLLQNGFTIGIGDTIADSSTMEKINETISNAKTAVKDLIRQFQGKELDPEPRTMRDTFNRVNQVLNKARDDAGSSAQKSLAETNLKAMVTASSFIISMTACVGNVEGKIPFGFDGTHFTKDDYGPESRFVENSYLRTPQFFAMGELIVSETIQRLVAMDIMVKGTVNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIRELRDVFDAEYSKLETDRFQLGTEIATNPLPVNIKHIWNAQKTFKIDLRKISDMHPVEIVDAVDKLQERLLVVPGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPEMICVAAQSIGA   [857]
116060036Ostreococcus                                      LELKPVYHHGFINVVLRVLRCVGYSSSQLLLHKDEFAQLMRIKNPKNRLKKLTDACKSVCPY-TGTAQPQYRLGMKITAEFKERKVVVTAERALQILKGISDEDCRVLLDPEHARPDWMILQVMPVPPPPVPSVDASTRSEDDLTVKLMEIVRTNKNLEREQNGAPQHVILEFTELLQYHIMTFMDNTVAGMPRALTRSGRSIKSISERLKGAGRIGNLMVDFSATTPPNLMLDELGWSIALNMTYPETVTPYIERLQRLVDNGPHPPPGARYIIREDGQRLDLRFLKASEKRLEYGYKVEHMVNGVVLSKMSIGRVRIMPYSTFLLSVTPPMLPSYETKAEVKELMMVPKMIVSPQANKPVMAIVTLGCRLITKRDTFIPKDVFMNIIMWLEDWDGKIPKAILKQPLTVFSMMLPKVNLLRTDDVTFSVDTGVRIEQGELLTTLCKKTMGSGGGGLIVTWEEWGPIAARGLISQTTLVNYWLLHHGFTVGIADTIADDETMFTINNTITKAKADVKEVIKQAQNNELELQPMTMQQSFQKVNQILNKARDNAGNSAQNSLKDTNVKMMVTASSFLISMIACVGNVEGKIPYGFKGTHFSKDDFGPESRFVENSYLRTPQFFAMGELIVSETIQRLVAMDVVVKGTVNSVGDVIQFLYGEDGMDATMIESQVLDTLRLGAKEFAAVFQIDPDVSGFNKGWLSNEQASDLAHSTKVREIIDAEWERLQKDRVELRKV-FPTHLPVNMKIIWNAQKQYGMYRPGGEELSVTHVIESVAELLPKLIVVAGTDPLSIEAQRNGTLLFFAHVRANLAAKRVLKDHKLTRAGFDWVIGEVESRFKMALAPPDGIVVAAQSIGA   [855]
226463578MicromonaspusillaCCMP1545                         LELKPVYHHGFINNVVRVLRCVGYSSSKLLLDKNDFVEIMKIRNPKHRLKKFADTCKKICPS-TGTPQPQYRLGMKITAEFKERKIQVTAEMALKILKNISDEDCIALLSPEHAHPSWYILQVLPVPPHPVPSVDASTRSEDDLTVKLMEIVRMNKNLQKEMNGAPQHVIGEFTELLQYHIMTFMDNTVAGQPRSLTRSGRPIKSISERLKGNGRIGNLMVDFSATTPPNLMLDELGWSIALNMTYPEMVTPYIERLRKLVENGPHPPPGAKYIIREDGQRLDLRFLKESDKRLEYGYRVEHMINGCVLSKMSIGRVRIMPYSTFMISVTPPMLPSLETRAEVQELMMVPKMIVSPQANKPVMAIVTLASRLMTKRDTFIKKDVFMNILMWLENWDGKVPKAILKEPLTVFTMFLPDVSLTKQDPHDFSVETGVRIEKGELITILCKKTLGSGGGGLIVIWEEWGPTAARGFVSQVWLLNYWLLQHGFTIGISDTIADDGTMNSINDTITKAKQDVKEVIALAQTNALELQPMTMQQSFQKVNQILNKARDNAGNSAQGSLDDTNVKMTVTASSFLISMIACVGNVEGKIPFGFDGSHFTKDDYGPESRFVENSYLRTPQFFAMGELIVSETIQRLVAMDIIVKGTVNSAGDVIQFLYGEDGMDATYVESQKIDTLRHDKEKFKRTFHLDPDEPNFGKGWMSEAQANDLANSVEKRALLEAEWEQLKLDRAELHKVMTTGHLPVNLKIVWNAQKNYGLSAPGRDELQAVNVIESVRSMLNGLTVVPGGDELSLEAQRNSTILFFALVRSTLSAKRVMKDFKLSPAAFNWVVGEVESRFKMALAPPDGITVAAQSIGA   [856]
3169691Porphyra                                            IELKPMFHAGFMGMTLKLLRCVCYFCSRLLITKVDVQKILKAKMRAARLRIMSGLC-RKCLIGCGHEQPKYKRGLKIRADFPERKQNVSAEKVLSVFKRISDNDAELMLSARWARPEWLILTLLPVPPPHVTSIDATQRGEDDLTHNLAVIVKNNTALRNEGHGAPAHRLAEQIFLLQFHVATYMNNDLPGMPRAAQKSGRPLKSISQRLKGEGRLGNLMVDFSATTPPNLRLDQVGFSIAKNLTFPETVTAYIEEMQQLVENGPDEYPDAKYIQRDDGYQVNLAYVNRADVQLEIGYKVVHITNGFIVSKMSIGRIKVMPYSTFLLSVTSPLVPTHATRAEVMELMMVPRCIVSPQGNKPVMGIVTLGCMLFTYRDTFLRRDVTMSLLLHVEGWDGVIPPAIIKEPLTLFSLLLPDVNLVRYESTDISPGTRVLIVGGELITIVDKRTVGSAANGLIVTWKEKGPERTCVLISAIVLVNHYVIMRGQSIGIGDTIADAHTDANVRATITGAQAEVTQLERRAQEGELTLLPKSMMESFVEVNKVLNGARDTSGSSAQLSLLKSNIKRMVSASSFIISICACVGNVEGKISYGFRRTHFRMDDLGPESRFVENSYLIRPSFFAMGELIVAETIQRLVAMDVMVKGTVNSRSSVIQFLYGEDGLDGALVEDQKLDTLRSTNDSFTKRYHLTEPDLQGVVQFSVLVAGGSQRYPLRRRRGAVSQGVGTAEEGPRLPTPRFKTPLAVNIELIWNAKRIFDVRQNDRSDLSPSKIVRGVELLLRTRVLTSDEDALSETAQLNATLLFQVHVRASLASKVVLSEHRLTRKAFTWLLIEIENRFQQALAPAEMVATAAQSIGA   [856]
3172134Bonnemaisonia                                       VELKPMFNIGFINISLKILRCVCHYCSKLLCSSASILHKITK--PTDRMRTAMRFTSKLCTAGCGHMQPKYSRGFRIRAIFEERKQTITAEKSYAIFKRISNSECEAMLSWRWSRPEWLILTLLPVPPPQVPSVRGGLRNEDDLTNKLGDIVKNNNTLRNEATGAVAHAIREQIDLVQYHVATYMNNELPGIMPATVRGGRAIKSIGQRFKGEGRVGNLMVDFSATTPPNLRLHEVGFSIARNLTYPEIVTSYIDEMQKLVENGPDEYPGAKYIEREDGFKVNLAYVNRSELQLELGYKVIHIRDGYVLSKMSIGRIRVLPYSTFLLSVTSPLVPTHQTRAEVQELMLVPHCIVSPQGNKPVMGIVTLGCMLFTQRDTFLERDLMMNLLMHVGDWDGVIPKAIYKRPLTVFSLILPPVNIIRFEKTDISPGTKVYISRGQLICIVDKRTVGSSANGLIITWKEFGPKITDTLISQIVLVNHYILQRRQSIGIGDTIADDATMRNVIDTIQGAKEEVKLLVRKAQEKELVLLPKGMMESFTEVNKVLNGARDKSGASAQRSLLKSNIKRMVSASSFIISICACVGNVEGKIAYGFHRTHFVLDDLGPESRFVENSYLRTPSFFAMGELIVAETIQRLIAMDIMVRGTVNSCNHIVEFLYGEDSMDATFLEDQVIRTAKMSDKKLRDEYFIDPSDPEKGRPYLDPNIVERVRQDAALHVELRLEFQQIEADRKLLRDYIIKTPLAVNVDVIWNAKQEHNIHADSVSDLKPDQVLKGVSMLLRTRVLVLGAENLMKEAQENATLLFQIHMRSMLACKKLIQLHRLTFKAFLWLLGEVENRFMMCRVAPENIAIAAQSIGA   [855]
12642610Botryocladia                                       IELKPMYNIGFIKTTLSVLRCVCHFCSKILCPDATVQSLLKISKPTVRLRNAMKYCSKICTGSCGNLQPKYTRGFRIRQQFDNKKPSLSAEKVYDIFKRISDRDSLALLDPRWVRPENLILTVLPVPPLQVPSVHGGLRNEDDLTNKLGDIVKNNNMLRDEAQGTVAHLLREQLDLVQYHVATYMNNEIPGVSQATVRGGRAIKSIGQRFKGEGRVGNLMVDFSATTPPNLLLHEVGYSIAKNLTFPETVTSYYAEMRKLVENGPTEYPGAKYIERDDGQKVNLSYVDRTSTNLEIGFKVIHIKDGYVLSKMSIGRIRVLPYSTFLLSVTSPLVPSHGTRAEVQELMLVPHCIVSPQGNKPVMGIVTLGCMLFTQRDTFIERDVMMNLLMHVGDWDGVVPEAIYKRPLTIFSLILPPVNLIRYEQEEISPGTKVYISQGQLICIVDKKTVGSSANGLIVTWKECGPKVTAMMISQIVLVNHYVLQRGQSIGIGDTIADDDTMSNVINTIKGAKEEVKMLIKKAQMKELVLLPKGMMESFTEVNKVLNGARDKSGASAQKSLLKSNIKRMVSASSFIISICACVGNVEGKIAYGFNGTHFATDDLGPESRFVENSYLRTPSFFAMGELIVAETIQRLIAMDVMVRGTVNSANHVVEFLYGEDGMDATLLEDQTLRTLKMSDERLFDEYYLDPTDAKFGRPYLDWETCDSIRQDAQAHILLRNEFQRIREDRDLLRNFIAKSPMAVNIDIIWNAKQAHNIRPDSVSDLTPVQVWKGIKMLLRTRVVEIGDEDIDRETQENATMIFQIHVRSMLACKQVMVRHRLDINAFLWILGEIENRFLGAIAAPENIAIAAQSIGA   [857]
12642618Stylonychia                                        IELRPVYHAGLLEFIRKVLRCCCFYCSRLLADKNKLEEIKRLKSSSAKLARVLKLSDKECDPGCGHRQPKFQKGLRIQVEYFDRKQILQADEALRVLERITDEDCELMFNPRISRPENMIIKNLAVAPPPVPSVSNTMRSEDDLTYCYQKILQTNITLQNINRGANMTTINELRTNLQYYVATVMDNEIQGQPTQKHKSGKPLKAIRARLRGEGRLGNLMVDFSATTPPNLQLDQLGQQIALNLTVPETVTNEIDEMRKLIERGPNIWPGAKYIIRHDDRQIDLSQMNRSEATIHPGFKVEHLRDNYVISKMSLGRVKVLPFSTFLLSVTTPMVPSYETMAEIKEIMAVPNQIVSPQSNKPVMGIVSLGVMLFTLKDTFIEKELVMQLLMWA-KYEDKFPMTILKRPLTIFSLIIPDINLQKVGLIWDSAGLNILIRKGELICNLTKGTIGSSSGGMIIIWKEKGPYCCRDFLSNTLIINNWLHQNGFTVGVQDIIAKKEIVQKIRDSMTKFKRDVTKIQQKAQLGKLKSQPKSMMESFASVNQCLNKARDDCGNMALADLSSWRLKAMVYASSNLISIMACVGNVEGKIPFGFYKSHFSKDDFGPESKFVENCYLNTPQFFAMGELIVAETIQRLIALDVMVKGTVTSKEQIIQFLYGEDGMAGEHIEDLTINLLKMKNTDVQNKCKFLSDNEQHLSKFMDREYAERIIRDPEICLQLENEYKQIIQDRDDLRFTILKSHLAVNVPIIWNAKEQFSIRPNQKSNLEPTYVLSRLQNLMDDLAPIPGHDPLILEANSDSTWLFKIYLRSLLNSKAVIQQERLSKDAFNWILGEIKSRFDQALVNPEMVSIGAQSMGA   [856]
37726869Gregarina                                          IEFKPVFNIGFLPAVITVLRCVCYSCGKLLVSQDDFLSVMRIRGPRARLAKLLTLCRPSCEPGCGCLQPQYRKNVNILVDFGDTKRVFSAEEVLAVFSKISEHDMKLMFDITFARPSWMVIQSMLVIPPCVPYVFGSDRSEDDLTIKLLDIVKVNRQLQKESTGVAQHVVQETVAVLQYHVATFMNNEIPGLPVATTKSKKPMKSIRERLKGEGRLGNLMVDFSATTGPNLQIDQVGRSIAMNLTYPELVTSMLEMLRKAVSNGPSVWPGARYITRTDGTRFDLRHCNPAVLQLEPGYKVEHVRDGYVLSKMSIGRVKVLPWSTFCLSVTAPLLASQETRAEIKQLCLVPKQIVSPQGNKPVMGIVSLGLAKMTSRDTFIDRPIMMGLCLWVRDWDGILPAVIYKEKLTLITMILKAVTLHRDDNEYLSANGRIIIQDSEHVAIICKRTAGTSSGSLIVLWHQCGPEKTKDFLSSTKVVNNWLVSIGFTVGVSDIVADSKTVSRVKEALDDSYVKVDELIRLARQGKLETQPKSLLESFNRVNQELNQAREASGRIAAENLTNKNIISMVNASSTIISIMACVGNVEGKIPFGFQDSHFLRHDYGPDSRFVYNSYLSLPHLFAMGEIICSETIQRLVAMDVLVTRTVNSNGEIVQFLYGEDGMAGEYVEDQLLDLLRLDYDKIEKRYKHNFRDPDYGTGWISKEVRDDIMYSIEKQTILVGEWQQLVQGHRRLCTEIFCDHLPVNIPLIQIAKSKYGADMTKV---SPIDIVQATEKLVNDLMVFSQLASIYKEAQNNATTLFSINCRTNLNSRKLMEKDKLGPQALDWLFKEVGRQFQRSLAPPEVVALAAQSIGA   [854]
239869222PerkinsusmarinusATCC50983                         LELKPMYHGGFLKTTLKALRCVCYYCSKLLADPNDIKRVLRVKNPKTRLQAMSVICKKVCDSGCGYAQPSYTVGMQIIVSFPDTKRPLSAETAYNILSRISVPDMIAMFTPGRSEPSWLILTVVPVPPPPVPSVGGTDRAEDDLTLKLQDIVKVNQMLKRLETGAGSHIVNEIAALLQWHLYTLQDNNIPGMPEAQTKSKKAIKSIRSRLKGEGRIGNLMVDFSATTGPNIDIDQVGKSIAMNLTFAERVTPLYAKMRELVMRGPTSWPGAKRIIRDDNSCIDLRFTQAQDIVLRYGWRVEHMQDNLVISKMSMGRAKILPFSTFLLSVTSPMLASHETRAEIRNIMMVPRQVVSPQGNRPVMGIVSLASTLLTKRDTFIEKDMCMQLLMWLPSWDGNMPMCILKRPLSLFSMLLPKISLQKDDDPWFSRSCRVIIQEGEIMSVICKKTVGASSGGLIITWLDYGPERTKQFIGGIRLVNFWLLHHGFTVGCADIVANDGTMQKVADTLAQAKRDVRKLVLDAQRGRLEAQPKSLQQSFARVNQRLNQAREDSGRLAADSLDDKNIIAMVDSSNPIIAIIACVGNVEGKIPTGFRDTHFTKDDFGPESRFVENSYLATPQFFAMGEIICAETIQRLISMSIKVRGSVNEMDEVVQFLYGEDGMTAEYIEDQDIELMKISHERLAAIAKHDYLNPDYGRGWIDEKVRSNIRMNHEVQAVLDREFENLKEMKRLLCTKVYKDHIPINVRLIDQCHYLFPAEEDPDVFYPPQEVVQKVEETLDRLRVIRGDQVLGWEAQHNATVVLQAHLRYHLASRKLLERDRLGQRAVDWLLGEVEQRFEKSLVAAESVTIAAQSIGA   [857]
Fragillariacy1.183150egw1.4.179.1                          LQLKPVYHQGYFNVALKTLRCVCFHCGRLKKLMDEMQVARKIKKRGKRLNAFHDILRKQCDH-CQGTQPKISKGLHLEAEYADSKQFLSGQTVVRIFQTMKEDDMKIILDTKYARPDWLLVQVLPVPPMHVPSVGGGAASEDDLTHQLVNVVKSNIALGNIQNGEPNIIVEQFEQALQHNVAAFMNNEIRGMPQVTQRSGRPLKTIQQRLKGEGRLGNLMVDFSATTAPNLGIHQVGRSVAMNLTVPDRVTAFMQELSQLVSNGPTMHPGAKHIIRSDGTRIDLRYVNKSELLLAHGWVVEQLRDDVILSKMSIGRVKVLDWSTFLLSCTSPLVPSITARAEAELMMLSPRVVVSGQSNRPVMGIVSIAVQKMTKRSTFIEKDLTFNMLMWVKNWNGRIPIAICKKELTLLGMILPKINLNAFLPNTFNAYNVVTIVEGELIQIIDKKTIGKGMDGLITSWLDQGHEETARFMNQVQLVNHWILQSSFSIGACDAVADMTTMKQIEATINKAKLQVLDLVRQGQQGNLEIQPRTMIESFQLVNKVLNTARDHAGKSAQSSLDETSVKAMVSASSFIISIIACVGNVEGKIPYGFKKTHFSKDDLGPESRFVENSYLRTPQFFAMGELICAETIQRLVAMTVMARGTVTSGGQIVQFLYGEDGMDAVWIERQDFDSLCLAKEEFEERFVLNTTDSDFGVPFLEPDVLEQCRTDPEVQLVLDKEADTLREDQAVLRIVMNREYAPGNIRTLQNALRQFRIDRGQPSDLHPKTIIHKVGELLDRLGVVVGDDPLSIEAQNNATTLYRVLVRSMLASKRVLKQYRLSEAALNWVISEVESRFHNAKVSPEMVVLAAQSIGA   [856]
Aureococcusan1.36761                                       IELRPCYHLGYIKEVLMCLRCVCFHCSRLMADPSDVQGAQK-YKAQKRLEAMHGLCRKRCEFGCGALQPTFRRAQSIEVEFQDRKQILSAHRAYEVLRNISDKDAKMLLDPKFARPEWLLITVLPVAPPHVPSIDSNARSEDDLTHQLVNIVKANKTLESCRAGEANHVVSQFEELLQYKVNALFDNEANAKDQERQRGGKPLKTIRQRLKGEGRIGNLMVDFSATTAPNLSIDQVGRSIAKTLTVPERVAPYVHALMELVRNGPEVWPGARYVVHADGRRVDLRFVHLNDLALHTGFVVEHLRDDLIVSKMSIARVKVLDHSTFLLSVTSPLVPNVAAKAELQQLMMVPRNVVSPQSNKPVMGIVSLASARMTSKETFIDQDLLFNIVMWVDDWDGVVPQAILKKPLTIFSLILPKLNFAGKGGNTLNWSGEVLIQSGRLVTVMDKKSLGTSGGSLIVIWLEMGHVAAMHFLNRVTTTNQWLVNVSFSIGIGDAVADQSTMRTIEKIIDEAKLKVKELVQKGQRGALECQPRTMIESFAMVNRVLNAARTSAGLSVQESISEANVKSMAMASNDIISIIACVGNVEGKIPYGFRRTHFAKDDLGPESRFVENSYLRSPQFYAMGELICAQTLQRLVSMSIMVKGTVNNQGNVVQFLYGEDGGDGVWVEKQKFASLLLNNDELREHYGVNLDWDVTGGVALALDVADACRQDVALAALLENELEQLQRDRDALRAIFCRENLPVNLALVWAAQRQFECGPRLEAQLDP-RTDDDADGVAAVDALVNAGRTETD--AEDPTALFAILIRCTLAARKCCFEYRLNRAAFDWLMGEIESRFVQARAHAEMCVLAAQSMGA   [853]
21280519Ochromonas                                         IELRAVFHCGFIDEVVRILRCVCFHCSRLLLDEKIDREVMQITDPETRFRKIHDRCNVKCEVPCGNVQPKFKRGLTIRITFSPRQRELSATEAYEVLRKISDEDVEMLFNPKYSRPDWMVVTVLPVPPPHVPTVEGDVQSQDDLTYQLTNIVKTNLILKDIMKGGSKLIIQEYEKALQAHVNALFDNERDDNPRVTQKTGRPLKTVRQRLKGEGRLGNLMVDFSATTAPNLSIDQVGRLYCFDLDCSNSDNHIIDELRDMVARGPLEWPGARYIVRADGVRIDLRKVSSNDVQLEYGWTVEHLRDDIVLSKMSTGRAKVLDWSTFLLSVTTPLVPSLTARADAQELMMVPRNIVTPQSNRNVMGIVALGVTRMTKRDVFVDKEVVMNTMVWLPTWDGNIPAAILKKPLTLFSMICPKINYRGRVTDPFNYLSEVLIHSGNLLQIVDKNIVGASGGSIVICWLSKGWEETRDFMNQIAVVNYWMVNTSYSVGVSDTVADATTINAIQSTLNEAKEKVKAIMTKAQEGSLKMMPKPLMESFM-INEVLNDARSTVGKAAQRSLKERAIKGTVMASSELISIIACVGNVQGKIAYGFNQTHFAKDDLGMESRFVENSYLRSPQFFAMGECIVAETIQRLVAMTVMAQTTLNSRGCVIQFLYGEDGMDAQRIEKQVFDSYTFTASKFREVYYLDVTSENERALYMHPLVIEKCRNDPELRMLLDEEYEQLLKDRGSLREIMCRGYLPVNIDLIWNAQRQFRININEPCPMHPRIVLDAVKKLCEDLLIVRGSDPISREAQSNATLLFQILVRSKLATKRVLRDYRLTKDALEWVVGAIVSDFRASVVHPEMAVLAAQSIGA   [856]
262101000PhytophthorainfestansT30.4                        VELRPMYHMGFIKEVLKILRCVCFHCSKVLSDERDFRSAMKIKNGKRRLKAVYEICSSMCEYGCGGLQPKYRKGIKLLVEFPDRKQNLPAAKVLSIFKNISDEDCFALLDPRWARPDWLVMTLMPVPPPHVPSVDGMARGEDDLTHNLASIVKANLALLNVRKGEPSHIIEQFEQLLQFHLATFLNNEQPGLPQAQQRSGKPLKTLRQRLRGEGRIGNLMVDFSATTAPNLAIDQVGRSIAMNLTVPERVTPFMNYMHQLIANGPLEHPGAKYIIREDGNRIDLRYINKSDLALKCGWIVEHLRDDLVLSKMSISRVKVFDWSTFLLSVTSPLVPSMTARADAQELMMVHKVIITPQSNRPVMGIVSLGAQKFTKRDIFLHKDWVMNLLMWVSNWDGKVPTAILVKPITIFSAIVPAINFTGFKFSDLSPISRVIIQQGELLAIIDKKIIGSSAGGLVITMLEKGPDETKRLLGAIQLVNNWLVGRSFTVGVSDTIADVSTLKTIVDIITQAKVQVHDLVVRGQKGKLETQPRTMVESFGLVNIVLNTARDQAGREAQGSLDETNIKATVTSSSFIISIIACVGNVEGKIPYGFNHTHYGKDDLGPESRFVENSYLKTPQFFAMGELIVAETIQRLVAMSVMTRGTVNAQGEIIQFLYGEDGMDAVWVEKQRFESHKLNKVQFEKKYVFDPSDECPDQLYLEPDIIKDIRTNQRTQQLLREELTQLQKDRVNLRVILSRGQIPVNIRLVENAQQLFSIDMRKPSSLHPSRIIEGVKELCKKIIVVQGDDRLSIEAQENATLFFQILLRSTLASKCVTLEHRLTETAFEWLMGEIESKFTSALVSAEMAVVGAQSIGA   [857]
299116996Ectocarpussiliculosus                             MELRPVYHCGFLDVTLKVLRSVCFHCSRLRFDKSDYKRALLIKNPKTRLSYIHEHCRKKCVFGCGGLLPKFTRGLQVEVEYPDRRQYLSASKVHDIFKNISEEDMVTLLNPQYSRPDWLVITVLPVPPPHVPSVDAGARSEDDLTHQLVNICKANMRLEAVRTGEPAHIVESFEQLLQYKVAALFDNERAGQPQETQRSGKPLKTLRARLKGEGRIGNLMVDFSATTAPNLGIDQVGKSIALNLTVPELVTAFVEEMAQLVARGPLEHPGARYIVRHDGVRVDLRFVNKNSLTLQYGYAVEHLRDDIIISKMSIGRVKVLDWSTFMLSVTSPLVPSLVAKAEAQELMMVPRNIVSPQSNKPVMGI-SLGVCKMTKRDTFVERDLLMNLLMWVETWDGKVPAAILKKPLTLFSLICPKVHGSRTGANPLNNSTKVLIHEGELMMNIDKKTVGSGAQGLIVSWLEKGWDVTRLFMNMIKLVNNWLVVTSFSIGVADTVADTETIMTIGGIIDTAKRNVQSLVEQGQKGELTMQPKSMMESLSSINKVLNTARDESGTSAQVSLNERAVKAMADASSFIISILACVGNVEGQIPYGFKRTHFAKDDLGPESRFVENSYLRSPQFFAMGELIVAETIQRLVALAVSAKGTLNQNNQVVQFLYGEDGMDGVWVEKQRFDILLMSKKDFRKAYEIDVNHAVTGQRYLTREVVDEAKTDETLRIELADELEQLRMDQKNLVVIFARGQVPVNIKLVWNSQKMFQIKSYGESDMSPTYVIRRVRELCEGLSVVTGEDSLSVEAQSNATMLFKILVRSEMSAKRTLMVYRLNKAAFDYVIGEIHAKFMSSKVGPEMCVLAAQSIGI   [856]
21280521Cercomonas                                         LELKPVIHVSFLPTILKLLRCVCYHCSAL-VSRDNFLEAARVKNPKKRLNAMLEVCRKDCGGGCGSTLPTYRRGIKIIVEFPDRKKNLSPQKIYDIFRNITDEDMTALLDPVNAHPSWFLLTVLPVPPPPVPSVDASTRASDDLTYKLGDIVKHNEQLKKEAQGAAEHILQDTHDLLQFSVATLFD-EISGLPRSDNEVVRLSNQFVKRLVGGGRIGNLMVDFSATTGPNLSVDQVGRSIAMTLTFPEMVTRFIAQMRRLVANGPNVHPGARTIIRDDGKRIDLRFVKSSDQHLEVGYRIEHIHDGVILSKMSIAKIRVMPWSTFLLSCTTPLVPSMMTRAEALEIMLCPRQIVSPQANKPVIGIVTLGCMKFTYRDNFLDKAMVFNILMHLENWDGTVPICILKVPLSIFSLIIPRVNMERKEHTVMSVNTRVRIEQGQLLMVVDKQTVGNTPGSLIVIWNECGFEATRQFLAECKVVNYFLMHYGFSVGIGDTIAPPSTLEKIESTIKQAKKEVLNLIKKA-SGNLDRQPSTNLESFNQVNGVLNKAADDAGKSVKAQLTKMNINAMVSASNAIICIIACVGNVSGKIPFGFHGTHFNKGDLSPESKFVSNSYLQTPQFFAMGELIVAETIQRLVAMDVMIKATVNSLGDIIQFAYGEDGMDGVYIEKQKLDSLKMDNARFLKTYQLDVSRP---LDFMDAEVREHLLRTPEAHDALETELKQLRDDRQLLRDKIQPTHLPVNLKLIWNAQKRFHVDRFSKSNIEPQQVIADVKSLAERLIVVRGTDPLSLQAQTNATTLFKIMLRSVLSAKRVLKDYRLNRDAFSWLIGEIEARFNQAIVHPEVVSIAAQAIGA   [851]
Emihu1JGI459546.estEtDGGenemark1.C5330004                  IELKPMYHVSFLENTMKTLRCVCFSCSVILGDEPPISRATRVKKPERRLRAVMDIAKSVCWS-CSTPQPTFKKGLMIRAEFKEKKLELTAERAHKILKGISDVDARRLFDPENARPDWMVITVLPVPPPQVPSIGAGGRGEDDLTVKLMDIVRTNRSLKEERNGAPNHIVLQHVSLLQYHLATLVTNTLPGVQPATTRSGRPLKSISQRLKGEGRVGNLMVDFSATTGPNLAIDEVGRTIARNLTYPEVVTPFIDRLQEL--RGAEGRRGARYIIRSDGMRLDLRM-PSVQKHLQYGYKVEMVEDGIVMSKMSISRVKIMPYSTFLLSVTTPLVMSMETRAEASEIMSVARCVVSPQSNKPVMGIVTLGSRGFTKRDTFLRKDMMMNLVMHLDTFTGKLPVAILKEPLTAQSLILPDFSMARFRTDELSPGTRVVIDRGELLCMLDKKSLGTGAGGVITIANEFGPQGVRAFIGAHRLVNYWILHRSYSIGIGDTIADAKTMDDIVATIDDSKREVKKLVEKAQNNKLECQPRTILESFNNVNQVLNKARDKAGTSAQKSLKETNVKNMVTTSSFIISMIACVGNVEGKIPYGFLNTHFTKDDYGPESRFVENSYLRTPQFFAMGELIVAETIQRLVAMGVTVKGTVNSQGEVLQFLYGEDGMDAVRLENQKIAHVGMHIDKLRKMFEHKFDDPPVGQPWMRPGLAEELKRDPLAKEELRQEFEQLLEDRRLLTDPRFAKPSPVNMNLLRKAQGLYPVDASKPSDLKPIDIVKKVRSLLDKLVVVKGTDALSVEAQYNATYNFFSLLRSQLASKR----------AFDWLLGEVESRFLQHRCQPEMVALAAQSIGA   [843]
HQ436411Jakobalibera                                       IELKPMYHVGYMNVVRKVLDCVCMKCSSPLFNPVSLGELAKYCNSKVRM------CGAAAGAGCGFTKPKITREYFLMKEEKVSQRILTAEEAHQVLKALTNEACEMLFNPNFARPDWLLVTVLPVPPPAVPSIGSGRAAQDDLTFKLGDILSTNQLLRREEHGVNPQTLRNTEEMLQFHLFTFVDNELAG------KSGKVLKSISQRLKGSGRINNLMVDFSASTAPILEIDQVGVDIAKIMTVP--------RLQELVNHGPSVHPGARFVFMEDGTRQDLEFS---NFPLAYGYTVEHLQDNVVLTRMGMGRVKTMKFKTFLLSVTSPLAPSLLTKAELLELVMIPKNMISPKSNSPVMGLVSLACRRITLRDVFLERDHFMNCLMWVDDFDGQLPMAILKKPLTLFSQILPKVNLRLRENTLVSPGTQVIIEQGELLAKCCKNTMGTSQGSLVVVYTEQGPEVCARMMGQVRLVNYWLLSLGFSIGIGDCVPDEITMRTITEAITDDKKQVTGVIKELHKRKLEKKPLTLLESFAVVNDKLNQARDKAGNAALESLSERNFKNMVTASNELISVIACVGNVEGRIPFGFRNTHFRQENYGPESKFVSNSYLSTPQFFSMGEIIVSETIQRLVAMDIMVRGTVDARGKVLQPPHNHPLLSSSQSSFTVLLACIMVS---------------------RAQVIESLRNDPTKVDELVDEVEQLREDRRALAI--FTSPMPVNVDLIVNAQKTFTIDMYSKSDLSPWQVLRAVKKLCSDVMVTNIPDS---EGSRNATYLFEIYLRTKLASKRVIQKYHLDKQSFEWLISEIRTRFFQALITPECVVIAAQSVGA   [808]
HQ436410Percolomonascosmopolitus                           INLQDVFHISYVTTVAKILRCICYKCSKLLVDIDSYQSLKNIVPKSKRFEKMVQLSRHRCKNGCTEEQPKSYKGLKIEAILRNNRENITPEAAKLKLERISDEHARDLFEPEHIRPHWMILSKLPVVPPCVPSIGTAGAGQDDLTYKLSDIVKTNNRLREEKNGETDFNISETRDLLMLYVAQMMDNTNPKLTQAIQKSGRVLKCISSKLKGERRLNNLMVDFSATTPPNLEIDQVGISIASNMTFPERVTLYMERLKEKVENG-SEYPGAKFIIHKDGTSVDVELASDEYKQLQPGYIVEHVEDDLILTKMSMGRVKVLPYSTFLVSVTSPLLPSLGAKAELQEMMMVSKNIVSTQGNAPVIAIVALGSVLMTKRDVFLEKDIMMNCCMRLENFNGELPQCILKKQLSLFSLVLKGVNLFREFDEDICPMTKVVISRGELISVADKRTLGKGGGSLITIFNEYSFIEASNFLNTLWVVNYWMLQHGYSIGVEDTIADENTADQVQQTLSKAHEEVSKYIKEAQEGKLKSKPMSLQESFAAVNKTLNDSMSSAGKNSASSLSKRRIKTMVVGSSNTISIIACVGNIEGKITFGFRKTHFEQNDHRPISRFVQNSYLRLPQFFTMGELIVAKTIQRLISMDFQVKGTVDSAGNILQFLYGEDGMDGVKLESQYFGMYKMSDKKFSETYQYETKNGEFGSKYLSQKIHEEFVTTPSRIHILEAEYQQLLRDRELLRDSIFSNCQPVNIKLLLNASKKY--LNRGKSDLDPIVIIQKVEELSKKLVVISGDDYLAREAQQNATILVNILIRFNLASKVVITKHKLNANGFEWILGEIETTFKRAFVQPEMVALAAQSIGA   [854]
284088088Naegleriagruberi                                  VRIHPVFNVLFINTVVKVLQSVCIHCGKLLADKSSFKKASKFVNRRKRFKEMIDLCRCIIETGCGGLQPKISRGLKIFAEYKLTKQELTAERALQIFKRIPAEDLELLFDKDNARPEWMILTCLPIPPPQVPSVGSADRSEDDLTHKLADIIKANAAIQKEKSGTPLHQMEEMVRMLQYHCATYVNNEYPGVPTATTKSGRPLKSIRQRLKGEGRVGNLMVDFSATTAPNIDIDQVGRTVASNMTVPEIVTPFFERLNELVTNGPLTYPGAKYVIREDGTRIDLRFAANDQIQLEYGYKVEHLQDGVILSKMSMGRIKVMPYSTFMLSVTTPLVPSLQTKAELLELMMVPRNIITPQSNRPVIALVTLAASKLTRRDVFIAKDLMMNCLMHLIDFDGKLPVAILKKPLTLFTFLLPKVNLENTLDHDIPEFTKVLIDRGELVSVLDKKSLGSSHGSLIIIVNEKGVNEGKKFLGQCRVINHWLINRGFSIGIGDTIADKATMEQIEETIRKAEKDVKLIVKDAQEGKLRAEARTIQQSFNQVNKVLNKAREDAGNKAKKSLKDDNIKSMVTASSYIISIIACVGNVEGKIPYGFRNTHFAQDDHGPESRFVANSYLRTPQFFTMGELIVSETIQRLIAMDIMVKGTVDAQGNVVQFLYGEDGMDAHKVESQSIDIMNLSDAKFQDKYWYNFTNPILKESFISTKVYDEILKDPTYLSKVREEYKTLMEDRHILRTEIFPNVMPVNLKIIKNAQKEYGIHPSIGSDMNPIYVIEKIKKLCDDLVVIKGTDELSTEAQTNATLLFSMFLRSTFSSKVVLKELCLTQEAFDFLVGEIRMRFHNCLAQPEMVSVAAQSIGA   [857]
HQ436409Diplonemasp2                                       ITLKPMLHFGYLRTMVNLLKCVCFHCSLIKLDPDDYREAAAKRLPEHRLRMFAKACASICEAGCGKPQPKIYHHSFNLWIEYDRKQRLQPEDARKILCKIRESQLHDLFSAQ-SRPEWMLLTEFPISPPAVPAIDAVTKTEDHTTYMYNKILIYNNKLKKVAQQAADSVIQDYSNLVQYHIVTLMDNEKNGIPKCKVRSGQPIKSIRERIKGGGRVSNLMVDFSATGGSQIGMDEVGLSIAANMTFPERVTSYQDILKVLVANGPDKYPGAKFIIREDGTRINLAFRKDSELFLQPGYIVEHVLTNVVLTRMSMGRARVMPFCTFLLSATSPLVPSVLSKSELQEFMMVPKNIISPKSNSPVMGIVSLGIHLLTKRSTFLDKQFMMNAVMHIPTMPAQIPIAILKEMLTLFSLVLPPVNFTATPDRFLPLATKVRIEKGNLHTIIDKKSVGSSENSLVVIHNEFSPDWARDLINGIRITAFYLINKGFSVGVQDTVADVNTKKMIQEIIRRSYDSVDELCNKAQEG-LKRQPKTVKETFANINKILNKTREDAGKRAQQSLTRSSFKVMVSASSYLISITAVVGNVGGKIPYGFRKTHFTQDDYGPESRFVQNSYLETPSFFMSGELICAETIQKLVALDLYVGATVDAQGRVVQFLYGEEGYDSTKMESRPLPLINLDNAARDKTYKHTWEEEEWGREFLEPRVREMLLQDPNAATKLQEEYEAVKDNREWLRKVFPAG-VPINLVLLDNAKINFDINPKGLSDLSPLEVIDGLDQLKKDLVVCRGFNSIHEERQFNGTRLWNVILQAFFASKRVICEYRLNAKAFQWLLGEVRQRYNSAQVPPEMVCIAAQSMGA   [854]
HQ436408Parabodocaudatus                                   ADLEPMFNIGFFDTVLATLRCVCQNCGKLLSNEKERRKLERTFLGNARLREISKISPGKCPS-CQYQQARLGRGLVIKA---DKDTVWYGTDAYRVLDKISVEDAIMLFDPRRAHPRDLLIKALPIPPPAVPAVFGSGVSENELTAKLTSIIRLNERLGRIADNSPSDMVASTRRLLQADLATYFNNASTYYKPAKVSQTMQLKSIYERLKGQGRLGNLMVNFSATTGPNIDVDEVGFSVAMTLTFPERVNHLRHRLTQIVR--SSQYPSANAIVSNSGTVWRLNGMRRQQLTLEIGDIVEQVLNGVVLTRMSMGRVRVLNYNTFLLSCTTPLVPSLLTKAELIEMMMVPKNFVSPNKSAPCMGIVSLGSWRITDKEVFLDKYFVQNVFMWLDLIPTELPIAILKRPLTMFSLILRETNITRELKKSFPHDAGTLIRNGDVLVQVDKGLIGASPGSFIVIFNDRGSDAVAQFINGVRLTTHYLYHFSFSVGVQDTLGDENTLRSVKEMIADARKQVRNRGSAANEKRLTRRAMTLMGSFFEVNSILNNVREKASPMVKNGVHRRSFRVMVDASSPLIYIVAAVGNIFGAIPFYFRRTHFMLDDYGDASKHVSRGYVEKPYFFTMGELIVAETFQKLVAMDLHVAGTVNADQEVVQFTYGEDGLDGARIESEKIDMVYYSNNKMKETFKFEYQEDNFGGVNMAPSVQAALKRDPRNLDILESEFKALMKSREAFRSWLAP-SLPVNLTVIRNAQIEGR-RSTELSNLNPINIIQDVRRLLDDLSKCHPRGPHSQERVENALRIFSVHVQSMLASKRVINEHKLDSKSFELVLKQIRLKYLQSVLVAEMIAMTAQSCGA   [849]
22002086Trycruzi                                           IDLEPVFNIGVFDIVLQVLKCVCKSCGALLMDTNDVHKKLQHLTGVNRLRQVVKMCGMKCRMGCGATQPRIGRTLIIKATLEEQDMVWHADTARQVLDRVSDEDARVMFDALRCHPRDLVLTVLPVPPPQVPAIFGSLKSDDELTHQIMSIVKRNNQLRKDKESDVQVAVDRSRALLQEHVAAYFNNASMYYKPTKVNDTKKLKSLTERLKGYGRLGNLMVDFSATTGPNIDVDEVGFSIAMTLTFPERVSAVKKRLTEFVR--RPVYPSANYIHHPNGTTTKLALRDRSKVTLNIGDVVEHVINGVVLTRMSMGRVRVLNYNTFLLSCTTPLVPSLLTKAELIEMMMVPKNFVSPNKSAPCMGIVSLGSYRLTDKDTFLDKYFVQSVALWLDLWQ--LPVAVLKRPLTVFSLILPEVNHPATERPPFPHNSSIMIRRGQLLCPITKGIVGAAPGSLIVIFNERGSDEVARFINGVRITTFFLINFGFSVGVQDTVADADTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAMTLLQSFADVNSALNKCREEAAKKALSNVRRTSFKVMIEASTDLICIAVFVGNVAGSIPFGFRRTHFMLDDYGETSRMANRGYVEKPHFFTMAELIVSDTLQKLIALDVHAAGTVNANQELIQFMYGEDGLDGARIEGQLFPLPFRDNKEMESTYKYEYDETKVGGAYMDPHVKKMLRADPENVRKLQSEFDQLMADRDWARRMMERENLPVNIGLIQNARSTMG-KRSQVSNLSPVTIIDHVRKLQDMLKLFPCGDGLSRQRIENALTLFSVHLRQLLASKRVLREYKLNDKAFEYLLKEIRTKYLQSLVSPENIAIAAQSCGA   [852]
HQ834947Malawimonasjakobiformis                            VELKPVFHYGFFKTVVKVLRCVCFYCSRLLADTSDFLRALTLKNRKHRFREVHDCCVKVCEAGCGNVQPHIKVMLRLVAEFPPRKMVLTPEKVHNILSHISDDDCRALFNPALARPDWMVISVLPVPPPAVPPIDSTTAAQDDLTFKLGDIVRTNVELKRIKAGAPQHIIDEFWLMLQYHVANIIETDISGFPPVQKGSGRVLKSIRSRLKGHGRIGNLMVDFSASTAPNLSVNEVGRTIALNLTYPETVTPFIQRMRQLVENGPHKHPGANYVIREDGERLDLRRIDRSTVPLSYGWKVEHIHDGVVVTKMSMGRVRVLPYSTFLLSVTTPLVPSHETRAELEELMMVPRNIVSPQANKPVMGIVSLGTKLFTKRDTFLERDLVNNTLMWLPSWDGHVPKAILKKQLTVFSLIVPPVNVLRKDNDDFTASTKVRIEQGEVLSIVCKNTVGNASGSLVIIWNELGHEATRNFLDSVTVINYWLMNRGFSIGIGDTIADPATMQNITKIIGRSKQEVSDLITQLHEGKLEATPRTLMETFMKVNTALNKARDEAGKAAVGSLRATAAKEMVTASSNIIAMIACVGNVEGKIPYGFRNTHFVTNDMTPESRFVENSYLRNPQFFAMGELIVSETIQRLMAMDVMVKGTVNSVGEVVQFLYGEDGFDGTAIEFQMLDHMFMDDLRFRKAYRIDADAP---EHYMQPDVLEDLRSNAEHMAALEREFARLVKDRLLRSEVFRPNPMPGNLKIIWNARKLFPTERDEVSDLHPVDVVAAVESLTRRLVIVPGTDFIAQEAQENATLLFGILVRSELAAKRVLTEYKLNKRSFEWVLGEIEHRFKAGRAAAEMVPIAAQSIGA   [854]
HQ834948Malawimonascaliforniana                            IELKPVFHMGFVKTIVKVMRCLCFFCSRLLTDTNDFRRALTLKNRKTRFREVMEACRHVCESGCGNVQPKIMFEWKMVAEFKARKIVLTPEKVYNILKNVSDEDSKAMFNPVLARPEWMLTTVLPVPPPAVPSIDSARAAEDDLTYKLSDIVKANNNLKLLERGAAPHIIQEFTQLLQYHIATMLDNEMPGMPSSQRGSGRPLKSIRQRLRGHGRIGNLMVDFSATTPPNLSVNEVGRTIALNLTYPEVVTPYIARMRQLIENGPMKHPGAKYILRDDGTRTDLRYAKPSELHLDYGYKVEHVQDGVVISKMSMGRIRILPWSTFLLSVTTPMVASPETRAEIEEIMMVPRQIVSPQANKPVMGIVSLGTKLFTKRDTFIERDLVMNVLMWLSTFEGKVPKAMLKKVLTIFSMLIPPVNLLRKLNEEFTYTTRVCIENGEVISIICKQTVGSSSGSLVVVWNEHGHEATRNFLDSVAVVNQWLLSRGFSVGIGDTIADKETMQQITRTIAAAKAQVASLIKQAQNHNLEPQPRTLMETFSKVNSALNTARDKAGKSAEQSLRSSNVKEMVTASSFIIAMIACVGNVEGKIPYGFRNTHFVAADYSPEARFVENSYLRNPQFFAMGELIVSETIQRLIAMDVMVRGTVNSLGDVIQFLYGEDGFDGTAIETQFLDTMFMNDRAFANMFKIDRDSP---ENYLLPEVLDDIRS--------NAEYMALR--KQVFAHSLVPNPLPVNLKIIWNASKRFPPRMDGPSDLHPVDVIAAVEELAGRLTVVPGTDPIAREAQENSTLLFLIQLRSTLASKRVIHEFKLTSESFPWLLGEIQARFKQGLAHPEMVPIAAQSIGA   [844]
110142366Trimastipyriformis                                ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GNLSVDFSGTSPPNLQIDEVARLIAMNMTYPERVHPAIERLRKLVINGPTVHPGANFIELRDGSKRFLKYGQKMAEQLRVGDIVEHLEDGIVLSKMSICRAKIMPWRTLFVCDCTPLLPTEEARAEAAVLMAVHQNLCTPRHGAPLIAPTFTGGYLM????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????   [857]
21842235GiardiaintestinalisWB                              VKFYDIFHPMIIDDLATLMNCFCPNCYHLFFRLFKINALNRLRDPTLNFPKLAELSAACCERGTSGVAPQPLISTRGSTARQDQDQLMDAHTCKLLITRYNKDDIVLLL--KRDHIENFIISSIQVGSRAVPSITDGTTAEDQLTEMYVSLFRNIRD---CNNNSLNAGGGATGAKSQIGPNDIYKTLISAKGLNADGGSVPTKGIFERLSGYGRMSNLMVNYCSSTGPTISINELGRSVASRLTFPEVVTARRDFLMKLVSNG-NRYPGDTQVINSTGTDADGRLGETTNDPLPLGTIVNHLLDGYVLTKSSFGRVKVLPYSTYLLSATSSLALSLEAVAEISELCMVSNQVVSVKDNRPIVYIVVLGCYLFTGKDVTIPFARVCEYIMWMPEYDLNVSQAICYEARTVFSMFVPRVFYRSGPKDISAHAKYISFLDGSVMCRIASSVVGGTESALIILFRDYGIEPCRAFIDNCRVVCRFMLDHGFSVGMGDMVSSEHTERKVAEIQTKLSKDISELFKLSIHYKIKLAPQSRNDAFQEVISKVSGTSLALEKVITDAAPHRALLVMINASKKFMMISSSLGFLQSKMPHRFTHSCYSPSSLNMESRYIFNSFIRNPAFYAVGEVCVADSVEKLLVMSVCYRNSVNDSNEIISFRYGDDGIDPHKSESREFKDFSISDMDFLRAHYIDMDESSPGIDDLDIGVKSSLVLERFAISTILVEYIVLLLERIWLQRSRLDTTFGMNLDIIQSEIQAGSIIRESACYLKPFEAIEKVNKLLSRIKSFRP----------KESTLFRVILRQCLSSKSCCYKYRLTSEQLDRILATIEEKFVRGQVSPEPVPLAGHSVSA   [841]
SpironucleusvortensJGIScaf14.195603.201146                 VKLEKVFHPMLVDKLAMIMNMFCPECRRLALKYFQDQVRRFLFPQFKRLPELHELTAICCDKDNGGLVKTEEI-KDGRVSTETSTQAVTPYEAFNIMERYLQEDIDLIL--KKSHPINMIMDSFPIAPRCIPTIMDGQSSRDQLTDMYSTLCKAIQ-----NYDSSQEANQLETKLKQEAVSKSFRVCKSSKGQEESAEK-TQKGIMERLRGYGRLNNCMVNFCSSSGPTISIDQLGKSTAKRLSFPERVTARREYLQKLV-DNPSQYPGAN-VIEKDGSLQRLDQGNMQQIRLEIGDVVHHLVDGYVMSKMSFARAKILPYSTFLLCATKPMEPHLQAISEMAEIMLVSKQVVSCKSNGPLMSIVSVGCQLMTQRDVFIDCANFQKYQMVVSDADMKTPQSVVFQPRTLFSLSLPSFSLTIGDNNPIVK-QAQIIFDGELVTICNNQIIGQAQCGLIVLWKDYSPDACRTFMDNCRIVTQFMADNSFSVGFGDMVISKKAKVECKTLADGLLQQVNAIIDRSVNGKIQLKPFTHEMSFGELNIAIQKCSEQMEKVVKGDLPKRALLHMVTSSKFFVLIASGLGYLQSNMKYKYTFTHFQPFDYFIDSRYVRSSFIQTPTFLMTGEVCIADSVEKMMNMSLGLTGSVDDRGQVVQIRYGEDSSDPHLTERKDYDIILQNDETFNKNCFLDTQQPKNKI-HMNETVINELN-NVESQKMLMLEYISLLVERCWLIYCQLTSNTSCDIQVININRFNNEIDQMK-TDLSPIYVISTVNHLLSEI?----------QCRDQESKLFRVLIRQLLSSKLVCY?YRITKA?FDKIIATIRKKFIKS?CSPEGVPLASHSISA   [832]
HM016232Trichomitusbatrachorum                             IKLTVLYHIGYIDIVYKILQCVCPSCSRLLVGYADVQEAVLRYKGKKRLLAIHAIATRYCKHPCGNAVPELTKENDGHIKKKGEPDLIESSKVLEILHNISEQDIRILFDPQKCRPEWMMVKILPVPPPHVPFIQGGHVTQDEVSHQLGQIILLNKKVQEITNGIPATKRQEDEFALQQCVTTYFINDKPSIDRATLKNGRPIKAISQRLKGMGHIGHLSVNFSASSPPSISIDQVGFELAKILTFPEVVNSLIKDMQQLVYNGPDSQDGAKAVITPLGARFSLGDTESTVQHLDYGSVVEHLRDNIVISKMSMGYAKLIRGQSFLLCVTTPLVVTQQARAEVKHIMAVPYQIITPQSNKPIIGLVCVGCRLLSIRDTFLTRNELMNLMMWIDKPDLVLPPCIVAQELSVFSLFLPQINLDKFDKSWNSSDVRVIIRDGHLLAIIDSKTVAKSEGSLTVVINSYSLDTAKAFLNQTLVVNNWLENRGFSMGISTCVTTQEALDKVAGQLTELKAKIETIIEDAKHDRLEKMPLTLTGTFAKIMEVANDFTEKSSAVAIQAAPFWALLQMMQASSKVIAIIACVGSIEGEVRFGFKNTHYVKDDFDLESRFVEHSYIQTPQFFSMGTIICADTIQRLCTMSHCVQGTVDSMNNVVQFLYGGDGIDPVQIETQSLSLIALSDQEFDSMYKMNINDPVFGAGYLESSIISDLRKEIRPSAVLQEELDTLLHFRQILREEIFPNYASVNLKIIETAQRKYNINEYTSSDLNPVLVVSEVKKLVSRLIIVQQNDKIGREVQDNGTLLLRILIHATLASKPLIEKNRLSQKAFRSIIGEIEDRFYRTIVSPEMVTIAGQSIGA   [857]
HM016223Hypotrichomonasacosta                              IRFRPLYHIGYIDIVYKILQCVCSKCGRLLASYSQLQSAVTHYHGRNRFLKVYEIIHAGCEHPCGSKQNELEKNAQGRISRKGESGIITAEVAYEILRQITDQDIRILFDPIRCHPKWMILKVLPVPPLHVPAVDGVHKSQDDVTKKLSTIIMCNNSLENINNGSANTVITEDLDTLQLHVTTYMVNDKPSIQRATMKNGRPFKAISQRLKGSGHIGHLSVNFSSSSPPSISIDQVGQEIARILTFPEVVTARLTEMQRLVYNGNEAQEGANYVITPQGTRINLAVTESTAMQLDHDSIVEHLRDDIVISKMSMGRARIMPGQTFLLCVTTPMVPSQMARAEAKHIMLVPNQIISPQSACPIIGLVSLGCRLLSLRDTFLTRNEITNLMMWIISNDIVLPPCILKKELSVFSLFLPKINYDGFVNTWESPALRVIIRNGNLLAILDKKTVAKSAGSLNVVINSYSIETARQFLNQTLIVNNWLENRGFSIGLSDCLAYEKTLDDVSDQIHQLKRNVLDIIDQAKHGKLETPPLTFMEGFSKINKLLNDLINDTGATVQKASRFWSLMQMVAASSLIISIIAVVGNVEGKIRYGFKGTHYVKDDYDLECRFCEHSFIQTPQFFAMGVIICSDTIQRLCSMSHCVMGTVNSLNEIVQFIYGGDGLEPTKLETQKCPLIELSDRVFDERFVMEINDPTFGVGKIQRDIIENLRSDVRSQERLQAETKRLRDFRDLMRTEIFPNTLSMKVQLIDTSKTVHDINEHTNSNLHPYFVIDEVDKLAKRLVVVPGDDPIGREAQDNATLLMRIQLYTMLASKPLILKERLSMDAFKWIIGEIEERFPETIVAPEMVTVAGQSIGS   [857]
HM016233Tritrichomonasfoetus                               LKLEPLFHIGYLDVVYKLMQCICHRCGRLKVNYAEFQRIIKNYHGKQRLIHMHEFCSKKCDHPCSHDVPEISRDEDGNFRLKGGIDIISASQILEIFKQMSDYDILALLDPKRSHPEWMICTVLPIPPPHVPPVEGSAPSQDDVTHKLASIIQANNHLLKKQEGAQQVALNENIELLQWHVTTYFINDKPSIKRATTKNGKPIKAISQRLKGEGHIGHLSVDFSASSPPSIRIDQVGQEIAKILTFPEVVTPRREELTKLVINGPEELKGANYIITPQQMKIDLSHAERTAIHLDDLAIVEHLTDGIVISKMSMGHALILPGSTFLLCVTTPLVPTQSARAEVKHIMLVPNQIITPQGNKPIIGLVSLACRLLSLKSSFLNRNEMMNLMMWVRKQNLVLPPCIIHGFLSVFSLFLPSINHDFVPGSWIPVDTRIIIRDGQLLAILDKDTVAKSEKSLAVVINSWDKNLARDFLSETMVVNSWLESRGFSIGLIDAVATDKTNETVDQQIRDLESDVKEIISRTQKGQLTIQPMTLIESFREVNTKLNKAIDACGSTVQKSSRFWSLVQMVKASSLLISIIATVGNIEGKIRFGFKNTHFTKDDFGLESRFCRHCFLENPPFFAMAEIICSDTIQRLCSMSHCVMGTVNSLNEVIQFIYGGDGLDPVGLETQNLTFMGDSDEDFDRKFRFDLTQAAFGQGIMDQEIVDELMSNPHTKNRLDHEINRLLKFRQILREEIFTDWLPVNIRLIESAQQSHHINPHSDSNLNPLTVIQKVEELVDQLVIVKGEDALSREAQDNATLLLRIHIFSNLASKPVIFQHRLTEQALIFVLGEIKTRFVQTIVSPEMVTIAGQSIGS   [857]
HM016222Dientamoebafragilis                                INLYPLFHFGYIDVVYKILNCVCHSCGRLLLSYGNVQRIVKNYQGKKRFDKIVEICRSSCEHTCGTIHYNVAREQDGTIRYKGNNEEFSAAAALDVFKLMKDCDIRVLLDPERSHPKWMILTILPVPPPHVPPVEGLNPSPDDVTQHLGTILRCNNNLKKKKGSNSQTTIKDSLGLLQWNVTTYFVNDKPSIKRAVTRNNKPIKSISQRLKGEGHIGHLNVDFSASSPPSIRIDQVGKHVAKILTFPEVVNPRRDELYRLVQNGPDELQGANFVINPQGIRFSLSRTERTTTHLDDGSIVEHLQDNIVISKMSMGHAVIMRGSTFLLSVTTPLVP??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????   [857]
HM016225MonocercomonasspNs1PRR                             IELEPVFHIGYIDIVYKILQCVCHNCGRLLVSYAELQHIVLNYHGKQRLIKIHELLKSCCPSPCGQTVPEISKESDFTLKMKSSSDILSAKSVLEILKHMNIYDIRVLFNTERARPEWMISTILPVPPPHVPAIDSSRPSQDDVTHKLATILQTNNHLKKIQDNAQQVAQQDAIEMLQYHISTYLINDKPALQRATTKNGRPIKAISQRLKGEGHIGHLSVNFSASSPPSISIDQVGLEIAKVLTFPEVVTPRREYLQQLVYNGPDAQQGANYIITPQGIRINLAVTERSALHLNDNAIVEHLRDDIVISKMSMGRAYLMPGSTFLLCDTTPLVPSQTARAEVKHIMFVPNQIISPQANKPIIGLVALACRLMTLRDTFLNRNQVMNLMMWIKKRDVVLPPCILKQQLSVFSLFLPEINHDAFDDSWLPVDKRVIIRDGKLLAILDLKTVAKSEKSLVVVINSWDKDIARDFLNQTLVVNNWLELRGFSIGIIDCIASPRTLEKVSEQLGDLKKSVDEITHSALNGTLKIQPMTLKETFSEVNTRSNDFINKSGDVVKNDSRFWSLMQMVAASSKIISILACVGNVEGKVPNGFKNTHYFKDDVGLEAKFCEHSYIQTPPFFSMGTIICSDTIQRLCFMSHCVQGTINSLNEVIQFLYGTDGMDPICLETQKIRLLSMDDNQFRNEYEFDLSLPTFGQGIMNADTIDEMNENIATRTILNRETERLLHFRKLLREEIFPSYLPVNITLLETAQQTHGINPHSDSDLHPINVIESVENVINKLVVVPGDDYISKEAQDNATLLLRILLYSNLAAKTLIFKYRLNEIAFKYVLGEVEVAFVKSIVSPEMVAIAGQSIGA   [857]
HM016224Monocercomonascolubrorum                           IELEPVFHIGYVDVVYKLLQCVCHNCGRLLVSYSELQKIVLNYHGKQRLVRILELTKHQCSHPCGQMIPEITKDGDFTIKMKNAQDALSAKKVLEILKHLSPLDTKILFDEEKAKPEWMICTILPVPPPHVPAIDGSNMCQDDVTHKLASIVQVNNHLKKIADNVQLVAKKEYIDLLQYHISTYFINDKPSLQRATTKNGRPIKAISQRLKGEGHIGHLSVNFSASSPPSISIDQVGLEIAKVLTFPEVVTARRDYLQKLVHNGPDHQDGANYIITPTGIRINLAVTERSALHLADNAIVEHLREDIVISKMSMGRAHLMPGSTFLLCVTTPLVPSQSARAEVKHIMLVPNQIITPQSNKPIIGLVALACRLMTLRDTFLTRNQVMNLMMWIKKRDVILPPCILKQQLSVFSLFLPEINHDGYDKSWLSYDKRVIIRNGKLLAILDSRTVARSEKSLVVIINSWDKDIARDFLNQTLVVNNWLESRGFSIGIIDCIASEKTLIKVSEILDNLKEKVDNITRSALSGTMTIQPMTLKESFQEVNSNSNDFINKSGAIVQNDARFWSLMQMVAASSKIISILACVGNVEGKVPNGFKNTHFFKDDMGLEAKFCEHSYIQTPPFFSMGTIICSDTIQRLCFMSHCVQGTVNSLNEIIQFVYGCDGMDPICLETQSIPLLEMDDNEFDREYEFDLSLPTFGQGIMRQEVIDGMNDNIATKDVLQKEIARLKHFRRILREEVFPTYLPVNIGLIQTAQQIHNINPHSDSDLHPIHVIDSVEKLVSKLIVVKGDDYIQKEAQDNATLLLRVLLYSSLAAKCLIFKHRLSEDAFRYILGEGEHAFIGSIVSPEMVTIAGQSIGA   [857]
HM016228PseudotrichomonaskeiliniNY0170                     ???TPLFHVGFADKVYKLLQIVCHKCGRLLCDYGEIQKIVKHCQGKQRFLKIFEHIKHECKHPCNEKVPEVVQAKDFLVAYKYDGDTISADHVFSIFENMSDQDIRILFNPIRSHPKWLILKVLPVPPLAVPQVGQSSPSQDDVTHKLIDIIRINNSIADTRNKGTETAIKQEKMLLQYHVTTYLINDKPSIARATTKNGRPLKVISMRLKGEGHIGHLSVDFSASSPPSISIDQVGKDLSKVLTFPEIVTKLQKWLQGLVDLGPNEEGGANVIITDQGIKTDLEICETCAQTISPGYIVEHIRDNIVISKMSMGRAVLMSGKTFLLCVTTPLVP??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????   [857]
HM016227Pentatrichomonashominis                            INLEPFFHIGFSDKVYKILQMVCHKCGRLLVSYSDVQYIVTHFKGKDRFTRIFEKISHKCAHPCNEAVPEVAMGKDFLVIYKTDEDYIPAERVLNIFENISDQDLRIMFDPKRSHPKWMILTVLPVPPLSVPQVGQAAPSQDDVTHKLHSLLQTNEHLKLLANGAPDTALAEDRQLLQWHISTYFINDKPSMDRAENKSHRPLKVISQRLKGEGHIGHLSVNFSASSPPSIEIDQVGKELAKILTFPEVVTTLQKWLEGIVAKGPDAEGGANFIISDTGTKTDLQFCKINTQNLSPGYTVEHLRDNIVISKMSMGRAFLMSGKTFLLCVTTPLVPSQTARAEVRHIMAVPYQIISPQANKPIIGLVALGSRLLSMKDTFLTRNQVMNLMMWLPEKDNILPPCILKVQLSIFSLFMPRINLDAYKKTMIPDNCKVIIRNGELLAIIDKKTVARGEQSLIVVINSYDIKTAKDFLSQTLIVNNWLEHRGFSIGLIDCVVPKFVTEEVDRALEELDRDVNKEIRGAMSGQLEPAPMTFMQTFFNVNSKLNGFLGKSSDIVKAHIRRDSLIEMNMASADSISIIASVANMEGKVRFGFRMTHYQKGMYGLIERFCKHSYVEEPPFIAMATIICSDTIQRLCSMSHHVAGTVNSMNEVVQFIYGGDGLDATGLETQNLRLSVMGDREFSEEYEMEVDDATFGQNVMEQRIIDDVQNMQNRHDVLNSEIKRLQDFRQLLQTEIFLKVLPVNITIIQTSQQMQGINVHSSSDLNPIDVIRRVDEKIRSLIVVKGTDAIAVTAQENATLLLRIMLYSNLSAKQIIFKHRLDEKAFEYVLGSISERFYRSIVSPEMVTIAGQSIGS   [857]
HM071003TetratrichomonasgallinarumturkeyGermany4114C505    ?????????GFHDKVYKLLQMVCHHCGRLNCNYSDLQQIVKNCKGKDRFNRVYELIGAKCKYPCGKEIPGVEMGKDLMVKYKSGVDYPSAETVLRIFSSMTDQDVRILFNVERSHPKWMILEVLPVPPLTVPQVGQSRPSQDDVTHKLVTIIQFNNRLAEKRQSATDTALKETRQFMQYHLTTYMINDKPSILRATTKNGRPLKVISQRLKGEGHIGHLSDDFSASSPPSISIDQVGMELAKILTFPEIVTTTQKWLESIVMKGPEDIGGANFVTSDHGVKTNLAMVDLTSQTLSPGYIVEHIRDDIVISKMSMGRAFLISGRTFLLCDT???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????   [857]
HM016240TrichomonasgallinaeracingpigeonAustria8855C306     IKLEPFFHVGFLKHVYKILQMVCHKCGRLNCSYGDIQYIATHYKGKQRFDAIFNYIARDCSDPCKSKPVAIEQGQDFLIKYKTEEDYLSAEYVLRIFENISDQDVRLMFNVKRSHPKWMILKVLPVPPLAVPQVGQSVPSQDDITHKLVDIIKINNNLIARNDSSTDTAMNDTRKLLQYHITTYFINDKPSILRATTKNGRPLKVISQRLKGEGHLGHLSDDFSASSPPSISIDQVGEDLAKILTFPEIVTTTQKWLESIVMKGHDDIGGANYVTNDHGTKTDLAFCDLSTIALSPGYIVDHIRDNIVISKMSMGRALLMPARTFLLCDTTPLVPSQAARAEVRHIMAVPKQIISPQANRPVIGLVALGCRLLSKRDTFLTRNQVMNLMMWLPNKDTILPPCILKVQLSVFSLFLPKINYDHFKKSWMPANTRVIIRDGHLLALLDKTSCARSEGSLTVVINSYNTDIAKDFLNQTLIVNNWLEHRGFSIGLIDCVVPQSVLDQVEEKINEVEDNVKGVIRTAQSGKLERRPMTYIQSFAEVNSALNQVLGDAYKLIQKDIRRDSFIEMLTASANFVTVIGVVANIEGKVKFGFNGTHYQKHEYGLIPRFCRHSYIETPPFLAMGTIICSDTIQRLVSMSHHVAGTVNSLNEVVQFVYGGDGLDATGLETQRLTLVDCDDKTFDKTYHLSPEDPLFGTDCMDSNVLDEFLNTPGKENRLMHEENRLREFREILQTDIFPTVLPVNIHLIETSQRQCGINPRASSDLNPLDVISRVEECANALTIVKGNDSISRTAQENATLLLKIMLFSNLSAKQVIFEHRLNESAFSWILGAIHDRFYRSIVAPEMVTIAGQSIGT   [857]
HM016234Trichomonastenax                                   IKLEPFFHVGFLKHVYKILQMVCHKCGRLNCSYGDIQYIATHYKGKQRFEKLFDYVADCCDSPCKSKSVAIEQGKDFLIKYKTEEDYLSAEYVLRIFENISDQDVRLMFNVKRSHPKWMILKVLPVPPLAVPQVGQSVPSQDDITHKLSDIIKNNNHLAARNDSSTDTAMNETRALLQYHITTYFINDKPSILRATTKNGRPLKVISQRLKGEGHLGHLSDDFSASSPPSISIDQVGEDLAKILTFPEIVTTTQKWLESIVMKGHDDIGGANYVTNDHGTKTDLAFCDLSTIALSPGYVVDHIRDNIVISKMSMGRALLMPARTFLLCDTTPLVPSQTARAEVRHIMAVPKQIISPQANRPVIGLVALGCRLLSKRDTFLTRNQVMNLMMWLPNKDTILPPCILKVQLSVFSLFLPKISYDSYDKNWIPKNSRVIIRDGNLLAILDKRSCARSEGSLTVVINSYNTNIAKDFLNQTLIVNNWLEYRGFSISLIDCVVPHFVLDKVEEGIMQVEENVRETIRTAQSGKLDRRPMTYIQSFAEVNSQLNKVLSIAYKTITENIRPDSFVEMLTASADFITVIGVVANIEGKVKFGFNGTHYQKHEYGLVPRFCKHSYIETPPFLAMGTIICSDTIQRLVSMSHHVAGTVNSLNEVVQFIYGGDGLDATGLETQFLNLVDLDDKKFDQTYHMNVDDPTFGSEAMDANILEEFLNTPGKEKKLQDEETRLKEFREILQTEIFPTVLPINISIIESSQRQFGINPHASSDLNPLDVIAKVQDCVNSLTIVKGNDSISLRAQENATLILKIMLYSNLASKQVIFTHRLNEQAFNWILGSIRDRFYRSIVAPEMVTIAGQSIGT   [857]
HM016229TrichomonasspRWG20071commongrounddove1             ?????????????????LLQMVCHSCGRVLCNYSDIQFIVRHYKGKNRFLKLFEKISQKCSSPCESTVPAVEQGKHFLIKYKNEDDYIPAEKVLRIFENISDQDVRLLFNVKRSHPKWLIIKILPVPPLAVPQVGQSVPSQDDVTHKLSDIIQVNNKLTQKNESSTDTAMKEVRQLLQYHITTYLCNDKPSIDRAQTKNGRPLKVISQRLKGEGHLGHLSDDFSASSPPSISIDQVGEQLAKILTFPEVVTPIQKWLESIVQKGADSIGGANYVINDRGTRTDLSLCDIMQVTLSNGYIVEHLRDDIVISKMSMGRALIMSGRTFLLCDTTPLVPSQTARTEVRHIMAVPKQIISPQANKPVIGLVALGCRLLSKRDTFLTRNQVMNLMMWLPTKDTNLPPCILKVQLSVFSLFLPKISHDSLDKNSLPLNRHVIIRDGNLLAILDKRTVARSEGSLIVVINSYNTNIAKDFLNQTLIVNNWLEHRGFSIGLIDCVVPSFVLEKVQDEITKVDNAVKDTILKAKQGKLERMPMSYMQSFTEVNNYLNEILNTTYKVINEKIRPDSLKEMLSASADSISIIGVVGNMEGKVKFGFSGTHYQKHEYGLVPRFCVNSYIATPPFLAMGTIICSDTIQRLCSMSHHVAGTVNSQNEVVQFIYGGDGLDATGLETQRLGLVGLDDKAFNKLYHLNVDDPTFGQDAMDANVLEDFLRSMDKDKKLQEEEHRLKEFREILQHEIFPDVLPVNIAIIESSQRQFDINVHVSSDLNPLDIIARVEDCVNSLIIVKGNDTISRRAQDNATLLLRIMLFSHLSAKQCIFKYRLNEQAFKYILGSVKDRFYRSICAPEMVTIAGQSIGS   [857]
HM016231TrichomonasspRWG20072whitewingeddove1200           IRLEPFFHVGFLPHCYKLLQMVCHKCGRVLCSYSDIQYIVTHYKGKNRFLKLFEKIAGKCQHPCNATVPAIEQGKDFLIKLKTEEDYLSAEVVLRIFENISDQDVRLLFNPKRSHPKWMILKILPVPPLAVPQVGQSAPSQDDITHKLSDIIICNKRLRARSESSTDTAMKETRTLLQYHITTYMINDKPSIERAVTKSGRPLKVISQRLKGEGHLGHLSDDYSASSPPSISIDQVGEQLAKILTFPEVVTPTQKWLESIVMKGHDDLGGANFVINDHGTRTDLSCCDLSTITLSPGYIVEHLRDDIVISKMSMGRALIMSGRTFLLCDTTPLVPSQTARTEVRHIMAVPKQIISPQANKPVIGLVALGCRLLSKRDTFLTRNQVMNLMMWLPTKDTILPPCILKVQLSVFSLFLPKISHDSYDQNSIPLARHVIIRDGNLLAILDKKTVARSEGSLIVVINSYNTNIAKDFLNQTLIVNNWLEHRGFSIGLIDCVVPDFVLQEVKHEIDEVESKVQATIIKAQDGQLERMPMSYMQSFTEVNNLTNEILSKTYKVINAKIRRDSLSEMLSASADTMSIIGVVGNMEGKVKFGFNGTHFQKHEYGLVERFCKNSYIATPPFLAMGTIICSDTIQRLVSMSHHVAGTVNSQNEIVQFIYGGDGLDATGLETQKLALVTLNDKEFMKKYHLASEDPTFGQVEMDDFVLDEFLKTPNKDKFLKEEENRLREYREILQKEIFPNVLPVNIAIIESSQRQFDINVHVSSDLNPLDIISRVDECVNSLIVVKGNDNISRTEQENATLLLRIMLYSHLSAKQCIFEYRLNEQAFKYILGSIKDRFYRSIVAPEMVTIAGQSIGS   [857]
HM016237TrichomonasvaginalisBiomedCI6                      IRLEPFFHVGFLPHCYKLLQMVCHKCGRVLCSYSDIQYIVTHYKGKNRFLKLFEKIAGKCQHPCNATVPAIEQGKDFLIKLKTEEDYLSAEVVLRIFENISDQDVRLLFNPKRSHPKWMILKILPVPPLAVPQVGQSAPSQDDITHKLSDIIICNKRLRARSESSTDTAMKETRTLLQYHITTYMINDKPSIERAVTKSGRPLKVISQRLKGEGHLGHLSDDYSASSPPSISIDQVGEQLAKILTFPEVVTPTQKWLESIVMKGHDDLGGANFVINDHGTRTDLSCCDLSTITLSPGYIVEHLRDDIVISKMSMGRALIMSGRTFLLCDTTPLVPSQTARTEVRHIMAVPKQIISPQANKPVIGLVALGCRLLSKRDTFLTRNQVMNLMMWLPTKDTILPPCILKVQLSVFSLFLPKISHNSYDQNSIPLARHVIIRDGNLLAILDKKTVARSEGSLIVVINSYNTNIAKDFLNQTLIVNNWLEHRGFSIGLIDCVVPDFVLQEVKHEIDDVESKVQATIIKAQDGQLERMPMSYMQSFTEVNNLTNEILSKTYKVINAKIRRDSLSEMLSASADTMSIIGVVGNMEGKVKFGFNGTHFQKHEYGLVERFCKNSYIATPPFLAMGTIICSDTIQRLVSMSHHVAGTVNSQNEIVQFIYGGDGLDATGLETQRLALVTLNDEDFMKKYHLATEDPTFGQVEMDDFVLDEFLKTPNKDKFLKEEENRLREYREILQKEIFPNVVPVNIAIIESSQRQFDINVHVSSDLNPLDIISRVDECVNSLIVVKGNDNISRTEQENATLLLRIMLYSHLSAKQCIFEYRLNEQAFKYILGSIKDRFYRSIVAPEMVTIAGQSIGS   [857]
;
END;


BEGIN mrbayes;

  set autoclose=yes nowarn=yes autooverwrite=no;
	outgroup 8;
    prset aamodelpr=fixed(wag) ratepr=variable shapepr=uniform(0.05,3) statefreqpr=fixed(empirical);
  	lset rates=invgamma ngammacat=8;
  	mcmc startingtree=random nruns=2 nperts=10 nchains=4 temp=0.5 savebrlens=yes ngen=2000000 samplefreq=1000 printfreq=1000 filename=rpb1csr01262011.out;
quit;
END;