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Research Article

A Comprehensive Evaluation of Alignment Algorithms in the Context of RNA-Seq

  • Robert Lindner,

    Affiliation: Institute of Pharmacy and Molecular Biotechnology, Heidelberg University, Heidelberg, Germany

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  • Caroline C. Friedel mail

    caroline.friedel@lmu.de

    Affiliation: Institute for Informatics, Ludwig-Maximilians-Universität München, Munich, Germany

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  • Published: December 26, 2012
  • DOI: 10.1371/journal.pone.0052403

About the Authors

Robert Lindner
Institute of Pharmacy and Molecular Biotechnology, Heidelberg University, Heidelberg, Germany
Caroline C. Friedel
Institute for Informatics, Ludwig-Maximilians-Universität München, Munich, Germany

Corresponding Author

Email: caroline.friedel@lmu.de

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: RL CCF. Performed the experiments: RL. Analyzed the data: RL CCF. Contributed reagents/materials/analysis tools: RL. Wrote the paper: RL CCF.