Advertisement
Research Article

Combining Next-Generation Sequencing and Microarray Technology into a Transcriptomics Approach for the Non-Model Organism Chironomus riparius

  • Marino Marinković,

    Affiliations: Microarray Department and Integrative Bioinformatics Unit, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands, Department of Aquatic Ecology and Ecotoxicology, Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands

    X
  • Wim C. de Leeuw,

    Affiliations: Microarray Department and Integrative Bioinformatics Unit, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, The Netherlands

    X
  • Mark de Jong,

    Affiliations: Microarray Department and Integrative Bioinformatics Unit, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, The Netherlands

    X
  • Michiel H. S. Kraak,

    Affiliation: Department of Aquatic Ecology and Ecotoxicology, Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands

    X
  • Wim Admiraal,

    Affiliation: Department of Aquatic Ecology and Ecotoxicology, Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands

    X
  • Timo M. Breit,

    Affiliations: Microarray Department and Integrative Bioinformatics Unit, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, The Netherlands

    X
  • Martijs J. Jonker mail

    M.J.Jonker@uva.nl

    Affiliations: Microarray Department and Integrative Bioinformatics Unit, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands, Netherlands Bioinformatics Centre (NBIC), Nijmegen, The Netherlands

    X
  • Published: October 25, 2012
  • DOI: 10.1371/journal.pone.0048096

About the Authors

Marino Marinković, Wim C. de Leeuw, Mark de Jong, Timo M. Breit, Martijs J. Jonker
Microarray Department and Integrative Bioinformatics Unit, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands
Marino Marinković, Michiel H. S. Kraak, Wim Admiraal
Department of Aquatic Ecology and Ecotoxicology, Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, The Netherlands
Wim C. de Leeuw, Mark de Jong, Timo M. Breit, Martijs J. Jonker
Netherlands Bioinformatics Centre (NBIC), Nijmegen, The Netherlands

Corresponding Author

Email: M.J.Jonker@uva.nl

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: MJ MJJ MM TMB WA WCL. Performed the experiments: MJ MM. Analyzed the data: MJJ MM WCL. Contributed reagents/materials/analysis tools: MHSK MM. Wrote the paper: MHSK MJJ MM TMB WA.