The Evolution of Mammalian Gene Families

Jeffery P. Demuth; Tijl De Bie; Jason E. Stajich; Nello Cristianini; Matthew W. Hahn

doi:10.1371/journal.pone.0000085

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Open Access

Peer-reviewed

Research Article

The Evolution of Mammalian Gene Families

Jeffery P. Demuth,

Affiliation Department of Biology and School of Informatics, Indiana University, Bloomington, Indiana, United States of America
⨯
Tijl De Bie,

Affiliation School of Electronics and Computer Science, ISIS Group, University of Southampton, Southampton, United Kingdom
⨯
Jason E. Stajich,

Affiliation Department of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, United States of America
⨯
Nello Cristianini,

Affiliation Department of Statistics, University of California Davis, Davis, California, United States of America
⨯
Matthew W. Hahn

*To whom correspondence should be addressed. E-mail: mwh@indiana.edu

Affiliation Department of Biology and School of Informatics, Indiana University, Bloomington, Indiana, United States of America
⨯

The Evolution of Mammalian Gene Families

Jeffery P. Demuth,
Tijl De Bie,
Jason E. Stajich,
Nello Cristianini,
Matthew W. Hahn

Published: December 20, 2006
https://doi.org/10.1371/journal.pone.0000085

About the Authors

Jeffery P. Demuth

Affiliation Department of Biology and School of Informatics, Indiana University, Bloomington, Indiana, United States of America

Tijl De Bie

Affiliation School of Electronics and Computer Science, ISIS Group, University of Southampton, Southampton, United Kingdom

Jason E. Stajich

Affiliation Department of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, United States of America

Nello Cristianini

Affiliation Department of Statistics, University of California Davis, Davis, California, United States of America

Matthew W. Hahn

*To whom correspondence should be addressed. E-mail: mwh@indiana.edu

Affiliation Department of Biology and School of Informatics, Indiana University, Bloomington, Indiana, United States of America

Author Contributions

Conceived and designed the experiments: MH JD. Performed the experiments: MH JD JS. Analyzed the data: MH JD JS. Contributed reagents/materials/analysis tools: MH TD JS NC. Wrote the paper: MH JD TD JS NC.

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Mammalian genomics
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Human genomics
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Chimpanzees
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Extinct genomes
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Genome annotation
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Evolutionary genetics
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Dogs
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Phylogenetic analysis
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