Phenotype Prediction Using Regularized Regression on Genetic Data in the DREAM5 Systems Genetics B Challenge

Po-Ru Loh; George Tucker; Bonnie Berger

doi:10.1371/journal.pone.0029095

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Open Access

Peer-reviewed

Research Article

Phenotype Prediction Using Regularized Regression on Genetic Data in the DREAM5 Systems Genetics B Challenge

Po-Ru Loh,

Affiliation Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
⨯
George Tucker,

Affiliation Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
⨯
Bonnie Berger

* E-mail: bab@mit.edu

Affiliation Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America
⨯

Phenotype Prediction Using Regularized Regression on Genetic Data in the DREAM5 Systems Genetics B Challenge

Po-Ru Loh,
George Tucker,
Bonnie Berger

Published: December 28, 2011
https://doi.org/10.1371/journal.pone.0029095

About the Authors

Po-Ru Loh

Affiliation Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America

George Tucker

Affiliation Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America

Bonnie Berger

* E-mail: bab@mit.edu

Affiliation Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Analyzed the data: P-RL GT BB. Wrote the paper: P-RL GT BB.

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Gene expression
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Phenotypes
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Genetics of disease
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Genetic predisposition
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Plant pathogens
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Genetic screens
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