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Open Access

Peer-reviewed

Research Article

Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies

  • Huixiao Hong ,

    huixiao.hong@fda.hhs.gov (HH); leming.shi@fda.hhs.gov (LS)

    Affiliation Center of Excellence for Bioinformatics, Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Lei Xu,

    Affiliation Center of Excellence for Bioinformatics, Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Jie Liu,

    Affiliation Division of Personalized Nutrition and Medicine, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Wendell D. Jones,

    Affiliation Expression Analysis Inc., Durham, North Carolina, United States of America

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  • Zhenqiang Su,

    Affiliation ICF International Company at National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Baitang Ning,

    Affiliation Division of Personalized Nutrition and Medicine, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Roger Perkins,

    Affiliation Center of Excellence for Bioinformatics, Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Weigong Ge,

    Affiliation Center of Excellence for Bioinformatics, Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Kelci Miclaus,

    Affiliation SAS Institute Inc, Cary, North Carolina, United States of America

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  • Li Zhang,

    Affiliation Office of Clinical Pharmacology, Center for Drug Evaluation and Research, U.S. Food and Drug Administration, Silver Spring, Maryland, United States of America

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  • Kyunghee Park,

    Affiliation Samsung Advanced Institute of Technology, Giheung-gu, Yongin-si Gyeonggi-do, Republic of Korea

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  • Bridgett Green,

    Affiliation Division of Personalized Nutrition and Medicine, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Tao Han,

    Affiliation Center of Excellence for Genomics, Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Hong Fang,

    Affiliation ICF International Company at National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  • Christophe G. Lambert,

    Affiliation Golden Helix Inc., Bozeman, Montana, United States of America

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  • Silvia C. Vega,

    Affiliation Rosetta BioSoftware, Health Solutions Group, Microsoft, Seattle, Washington, United States of America

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  • Simon M. Lin,

    Affiliation Biomedical Informatics Research Center, Marshfield Clinic Research Foundation, Marshfield, Wisconsin, United States of America

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  • Nadereh Jafari,

    Affiliation Center for Genetic Medicine, Northwestern University, Chicago, Illinois, United States of America

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  • Wendy Czika,

    Affiliation SAS Institute Inc, Cary, North Carolina, United States of America

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  • Russell D. Wolfinger,

    Affiliation SAS Institute Inc, Cary, North Carolina, United States of America

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  • Federico Goodsaid,

    Current address: Vertex Pharmaceuticals, Washington, D.C., United States of America

    Affiliation Office of Clinical Pharmacology, Center for Drug Evaluation and Research, U.S. Food and Drug Administration, Silver Spring, Maryland, United States of America

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  • Weida Tong,

    Affiliation Center of Excellence for Bioinformatics, Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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  •  [ ... ],
  • Leming Shi

    huixiao.hong@fda.hhs.gov (HH); leming.shi@fda.hhs.gov (LS)

    Affiliation Center of Excellence for Bioinformatics, Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, Arizona, United States of America

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