Mapping Accuracy of Short Reads from Massively Parallel Sequencing and the Implications for Quantitative Expression Profiling

Open Access

Peer-reviewed

Research Article

Nicola Palmieri,

Affiliation Institut für Populationsgenetik, Veterinärmedizinische Universität Wien, Vienna, Austria
⨯
Christian Schlötterer

* E-mail: christian.schloetterer@vu-wien.ac.at

Affiliation Institut für Populationsgenetik, Veterinärmedizinische Universität Wien, Vienna, Austria
⨯

Reader Comments

While Bowtie also allows insertions, the high demand on CPU time prevented us from a systematic evaluation of this software.
http://plosone.org/article/info:doi/10.1371/journal.pone.0006323#article1.body1.sec2.p11

While SeqMap also allows insertions, the high demand on CPU time prevented us from a systematic evaluation of this software.

No competing interests declared.

Invertebrate genomics
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Gene expression
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Drosophila melanogaster
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Gene mapping
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Human genomics
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Insertion mutation
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