NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence

Morten Nielsen; Claus Lundegaard; Thomas Blicher; Kasper Lamberth; Mikkel Harndahl; Sune Justesen; Gustav Røder; Bjoern Peters; Alessandro Sette; Ole Lund; Søren Buus

doi:10.1371/journal.pone.0000796

Loading metrics

Open Access

Peer-reviewed

Research Article

NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence

Morten Nielsen ,

*To whom correspondence should be addressed. E-mail: mniel@cbs.dtu.dk

Affiliation Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Lyngby, Denmark
⨯
Claus Lundegaard,

Affiliation Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Lyngby, Denmark
⨯
Thomas Blicher,

Affiliation Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Lyngby, Denmark
⨯
Kasper Lamberth,

Affiliation Department of Experimental Immunology, Institute of Medical Microbiology and Immunology, University of Copenhagen, Copenhagen, Denmark
⨯
Mikkel Harndahl,

Affiliation Department of Experimental Immunology, Institute of Medical Microbiology and Immunology, University of Copenhagen, Copenhagen, Denmark
⨯
Sune Justesen,

Affiliation Department of Experimental Immunology, Institute of Medical Microbiology and Immunology, University of Copenhagen, Copenhagen, Denmark
⨯
Gustav Røder,

Affiliation Department of Experimental Immunology, Institute of Medical Microbiology and Immunology, University of Copenhagen, Copenhagen, Denmark
⨯
Bjoern Peters,

Affiliation La Jolla Institute for Allergy and Immunology, San Diego, California, United States of America
⨯
Alessandro Sette,

Affiliation La Jolla Institute for Allergy and Immunology, San Diego, California, United States of America
⨯
Ole Lund,

Affiliation Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Lyngby, Denmark
⨯
Søren Buus

Affiliation Department of Experimental Immunology, Institute of Medical Microbiology and Immunology, University of Copenhagen, Copenhagen, Denmark
⨯

NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence

Morten Nielsen,
Claus Lundegaard,
Thomas Blicher,
Kasper Lamberth,
Mikkel Harndahl,
Sune Justesen,
Gustav Røder,
Bjoern Peters,
Alessandro Sette,
Ole Lund

Published: August 29, 2007
https://doi.org/10.1371/journal.pone.0000796

Reader Comments

Post a new comment on this article

SciVee vidoe

Posted by mniel on 31 Jan 2008 at 23:07 GMT

We have make a short video presentation of the work in the paper available at SciVee (http://www.scivee.tv/node...). In the video S. Buus and myself explain in some more details in biological background of the work and the significance of the results.

Subject Areas
?

For more information about PLOS Subject Areas, click here.
We want your feedback. Do these Subject Areas make sense for this article? Click the target next to the incorrect Subject Area and let us know. Thanks for your help!

Phylogenetic analysis
Is the Subject Area "Phylogenetic analysis" applicable to this article?

Thanks for your feedback.
Artificial neural networks
Is the Subject Area "Artificial neural networks" applicable to this article?

Thanks for your feedback.
Major histocompatibility complex
Is the Subject Area "Major histocompatibility complex" applicable to this article?

Thanks for your feedback.
Neural networks
Is the Subject Area "Neural networks" applicable to this article?

Thanks for your feedback.
Binding analysis
Is the Subject Area "Binding analysis" applicable to this article?

Thanks for your feedback.
Database and informatics methods
Is the Subject Area "Database and informatics methods" applicable to this article?

Thanks for your feedback.
HIV
Is the Subject Area "HIV" applicable to this article?

Thanks for your feedback.
Intracellular pathogens
Is the Subject Area "Intracellular pathogens" applicable to this article?

Thanks for your feedback.

NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence

NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence

Reader Comments

Post Your Discussion Comment

Why should this posting be reviewed?

Thank You!

SciVee vidoe

Posted by mniel on 31 Jan 2008 at 23:07 GMT